Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Sdc2P43407 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Sdc2P43407 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sdc2P43407 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sdc2P43407 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Sdc2P43407 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sdc2P43407 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Sdc2P43407 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.58■□□□□ 0.56
Sdc2P43407 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sdc2P43407 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sdc2P43407 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sdc2P43407 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sdc2P43407 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc2P43407 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc2P43407 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
Sdc2P43407 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc2P43407 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc2P43407 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc2P43407 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc2P43407 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc2P43407 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc2P43407 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc2P43407 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.57■□□□□ 0.56
Sdc2P43407 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc2P43407 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc2P43407 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc2P43407 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.57■□□□□ 0.56
Sdc2P43407 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc2P43407 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.57■□□□□ 0.56
Sdc2P43407 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc2P43407 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc2P43407 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sdc2P43407 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Sdc2P43407 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdc2P43407 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdc2P43407 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdc2P43407 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC18.56■□□□□ 0.56
Sdc2P43407 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdc2P43407 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdc2P43407 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdc2P43407 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.56■□□□□ 0.56
Sdc2P43407 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.56■□□□□ 0.56
Sdc2P43407 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdc2P43407 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdc2P43407 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdc2P43407 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Sdc2P43407 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdc2P43407 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdc2P43407 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdc2P43407 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdc2P43407 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Sdc2P43407 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdc2P43407 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sdc2P43407 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sdc2P43407 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Sdc2P43407 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sdc2P43407 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sdc2P43407 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sdc2P43407 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sdc2P43407 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sdc2P43407 Gm22240-201ENSMUST00000175225 82 ntBASIC18.55■□□□□ 0.56
Sdc2P43407 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sdc2P43407 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sdc2P43407 Gm10812-201ENSMUST00000099864 546 ntBASIC18.55■□□□□ 0.56
Sdc2P43407 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sdc2P43407 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sdc2P43407 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sdc2P43407 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sdc2P43407 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sdc2P43407 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Sdc2P43407 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Sdc2P43407 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Sdc2P43407 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.54■□□□□ 0.56
Sdc2P43407 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sdc2P43407 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sdc2P43407 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sdc2P43407 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sdc2P43407 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Sdc2P43407 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.54■□□□□ 0.56
Sdc2P43407 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sdc2P43407 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sdc2P43407 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sdc2P43407 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC18.54■□□□□ 0.56
Sdc2P43407 Gm21814-202ENSMUST00000203277 873 ntBASIC18.54■□□□□ 0.56
Sdc2P43407 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sdc2P43407 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.54■□□□□ 0.56
Sdc2P43407 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sdc2P43407 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sdc2P43407 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sdc2P43407 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sdc2P43407 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.54■□□□□ 0.56
Sdc2P43407 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Sdc2P43407 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Sdc2P43407 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Sdc2P43407 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Sdc2P43407 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sdc2P43407 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.53■□□□□ 0.56
Sdc2P43407 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Sdc2P43407 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Sdc2P43407 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms