Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Abca1P41233 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Abca1P41233 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.71□□□□□ -0.21
Abca1P41233 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.71□□□□□ -0.21
Abca1P41233 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.71□□□□□ -0.21
Abca1P41233 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abca1P41233 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abca1P41233 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Abca1P41233 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Abca1P41233 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abca1P41233 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abca1P41233 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC13.71□□□□□ -0.21
Abca1P41233 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abca1P41233 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abca1P41233 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Abca1P41233 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Abca1P41233 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Abca1P41233 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abca1P41233 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abca1P41233 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Abca1P41233 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Abca1P41233 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.71□□□□□ -0.21
Abca1P41233 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.71□□□□□ -0.21
Abca1P41233 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Abca1P41233 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.71□□□□□ -0.21
Abca1P41233 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.71□□□□□ -0.21
Abca1P41233 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.71□□□□□ -0.21
Abca1P41233 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.71□□□□□ -0.21
Abca1P41233 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Abca1P41233 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Abca1P41233 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.71□□□□□ -0.22
Abca1P41233 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC13.71□□□□□ -0.22
Abca1P41233 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
Abca1P41233 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Abca1P41233 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Abca1P41233 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Abca1P41233 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Abca1P41233 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Abca1P41233 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Abca1P41233 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC13.7□□□□□ -0.22
Abca1P41233 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.7□□□□□ -0.22
Abca1P41233 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Abca1P41233 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Abca1P41233 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
Abca1P41233 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Abca1P41233 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Abca1P41233 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Abca1P41233 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Abca1P41233 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Abca1P41233 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Abca1P41233 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Abca1P41233 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.7□□□□□ -0.22
Abca1P41233 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC13.7□□□□□ -0.22
Abca1P41233 Gm12895-201ENSMUST00000122214 226 ntBASIC13.7□□□□□ -0.22
Abca1P41233 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Abca1P41233 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Abca1P41233 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.7□□□□□ -0.22
Abca1P41233 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.7□□□□□ -0.22
Abca1P41233 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Abca1P41233 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Abca1P41233 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Abca1P41233 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Abca1P41233 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Abca1P41233 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Abca1P41233 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Abca1P41233 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC13.69□□□□□ -0.22
Abca1P41233 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Abca1P41233 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Abca1P41233 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Abca1P41233 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Abca1P41233 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Abca1P41233 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Abca1P41233 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Abca1P41233 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Abca1P41233 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Abca1P41233 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Abca1P41233 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.69□□□□□ -0.22
Abca1P41233 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Abca1P41233 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.69□□□□□ -0.22
Abca1P41233 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Abca1P41233 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Abca1P41233 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abca1P41233 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abca1P41233 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.68□□□□□ -0.22
Abca1P41233 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abca1P41233 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abca1P41233 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abca1P41233 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.68□□□□□ -0.22
Abca1P41233 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Abca1P41233 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Abca1P41233 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.68□□□□□ -0.22
Abca1P41233 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abca1P41233 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abca1P41233 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abca1P41233 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Abca1P41233 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abca1P41233 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abca1P41233 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Abca1P41233 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Abca1P41233 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms