Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.55□□□□□ -0.24
Timp3P39876 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Timp3P39876 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Timp3P39876 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.55□□□□□ -0.24
Timp3P39876 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Timp3P39876 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Timp3P39876 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
Timp3P39876 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Timp3P39876 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Timp3P39876 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Timp3P39876 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Timp3P39876 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Timp3P39876 Actl10-202ENSMUST00000226583 1501 ntBASIC13.54□□□□□ -0.24
Timp3P39876 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Timp3P39876 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Timp3P39876 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Timp3P39876 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Timp3P39876 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Timp3P39876 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Timp3P39876 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Timp3P39876 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Timp3P39876 Gm7284-201ENSMUST00000131667 944 ntBASIC13.54□□□□□ -0.24
Timp3P39876 Gm27704-201ENSMUST00000185094 107 ntBASIC13.54□□□□□ -0.24
Timp3P39876 Gm29518-201ENSMUST00000190858 372 ntBASIC13.54□□□□□ -0.24
Timp3P39876 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.54□□□□□ -0.24
Timp3P39876 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Timp3P39876 AC122351.1-201ENSMUST00000220467 126 ntBASIC13.54□□□□□ -0.24
Timp3P39876 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Timp3P39876 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Timp3P39876 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Timp3P39876 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Timp3P39876 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.54□□□□□ -0.24
Timp3P39876 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Timp3P39876 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Timp3P39876 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Timp3P39876 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Timp3P39876 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Timp3P39876 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.54□□□□□ -0.24
Timp3P39876 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Timp3P39876 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Timp3P39876 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Timp3P39876 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Timp3P39876 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC13.54□□□□□ -0.24
Timp3P39876 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Timp3P39876 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Timp3P39876 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Timp3P39876 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Timp3P39876 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Timp3P39876 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Timp3P39876 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Timp3P39876 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Timp3P39876 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.53□□□□□ -0.24
Timp3P39876 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.53□□□□□ -0.24
Timp3P39876 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Timp3P39876 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.53□□□□□ -0.24
Timp3P39876 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Timp3P39876 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Timp3P39876 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Timp3P39876 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Timp3P39876 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Timp3P39876 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Timp3P39876 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Timp3P39876 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Timp3P39876 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Timp3P39876 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Timp3P39876 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.53□□□□□ -0.24
Timp3P39876 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Timp3P39876 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Timp3P39876 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Timp3P39876 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Timp3P39876 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Timp3P39876 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Timp3P39876 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Timp3P39876 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Timp3P39876 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Timp3P39876 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Timp3P39876 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Timp3P39876 Gm9103-201ENSMUST00000119371 405 ntBASIC13.52□□□□□ -0.25
Timp3P39876 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.52□□□□□ -0.25
Timp3P39876 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Timp3P39876 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Timp3P39876 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
Timp3P39876 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Timp3P39876 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Timp3P39876 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Timp3P39876 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Timp3P39876 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Timp3P39876 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Timp3P39876 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Timp3P39876 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Timp3P39876 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Timp3P39876 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Timp3P39876 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Timp3P39876 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Timp3P39876 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Timp3P39876 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Timp3P39876 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Timp3P39876 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Timp3P39876 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Timp3P39876 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms