Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Fen1P39749 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Fen1P39749 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Fen1P39749 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.7■□□□□ 0.26
Fen1P39749 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Fen1P39749 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Fen1P39749 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Fen1P39749 Alkbh1-212ENSMUST00000185301 408 ntBASIC16.7■□□□□ 0.26
Fen1P39749 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Fen1P39749 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Fen1P39749 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Fen1P39749 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Fen1P39749 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Fen1P39749 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Fen1P39749 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Fen1P39749 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Fen1P39749 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Fen1P39749 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Fen1P39749 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Fen1P39749 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Fen1P39749 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Fen1P39749 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Fen1P39749 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Fen1P39749 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Fen1P39749 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Fen1P39749 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Fen1P39749 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Fen1P39749 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Fen1P39749 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Fen1P39749 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Fen1P39749 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Fen1P39749 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Fen1P39749 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Fen1P39749 Gm22240-201ENSMUST00000175225 82 ntBASIC16.69■□□□□ 0.26
Fen1P39749 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.69■□□□□ 0.26
Fen1P39749 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.69■□□□□ 0.26
Fen1P39749 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Fen1P39749 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Fen1P39749 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.69■□□□□ 0.26
Fen1P39749 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Fen1P39749 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Fen1P39749 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Fen1P39749 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.69■□□□□ 0.26
Fen1P39749 Gm43859-201ENSMUST00000200075 1412 ntBASIC16.69■□□□□ 0.26
Fen1P39749 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Fen1P39749 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.68■□□□□ 0.26
Fen1P39749 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fen1P39749 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fen1P39749 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Fen1P39749 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fen1P39749 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Fen1P39749 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fen1P39749 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.68■□□□□ 0.26
Fen1P39749 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Fen1P39749 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Fen1P39749 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Fen1P39749 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.68■□□□□ 0.26
Fen1P39749 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fen1P39749 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fen1P39749 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fen1P39749 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fen1P39749 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Fen1P39749 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Fen1P39749 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Fen1P39749 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fen1P39749 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Fen1P39749 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Fen1P39749 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fen1P39749 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.67■□□□□ 0.26
Fen1P39749 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Fen1P39749 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Fen1P39749 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.67■□□□□ 0.26
Fen1P39749 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fen1P39749 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fen1P39749 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Fen1P39749 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.67■□□□□ 0.26
Fen1P39749 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fen1P39749 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fen1P39749 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Fen1P39749 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Fen1P39749 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Fen1P39749 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Fen1P39749 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Fen1P39749 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Fen1P39749 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Fen1P39749 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Fen1P39749 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
Fen1P39749 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Fen1P39749 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Fen1P39749 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Fen1P39749 Gm12896-201ENSMUST00000118430 226 ntBASIC16.66■□□□□ 0.26
Fen1P39749 Gm8520-201ENSMUST00000186517 868 ntBASIC16.66■□□□□ 0.26
Fen1P39749 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Fen1P39749 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Fen1P39749 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Fen1P39749 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Fen1P39749 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Fen1P39749 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Fen1P39749 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Fen1P39749 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms