Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thbs1P35441 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thbs1P35441 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thbs1P35441 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thbs1P35441 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thbs1P35441 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.3■□□□□ 0.04
Thbs1P35441 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thbs1P35441 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Thbs1P35441 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.3■□□□□ 0.04
Thbs1P35441 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thbs1P35441 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thbs1P35441 Phf7-203ENSMUST00000226565 1971 ntBASIC15.29■□□□□ 0.04
Thbs1P35441 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thbs1P35441 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thbs1P35441 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thbs1P35441 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thbs1P35441 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Thbs1P35441 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Thbs1P35441 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Thbs1P35441 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thbs1P35441 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.29■□□□□ 0.04
Thbs1P35441 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Thbs1P35441 Gm43799-201ENSMUST00000201845 579 ntBASIC15.29■□□□□ 0.04
Thbs1P35441 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Thbs1P35441 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.29■□□□□ 0.04
Thbs1P35441 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thbs1P35441 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thbs1P35441 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thbs1P35441 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Thbs1P35441 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thbs1P35441 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thbs1P35441 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.29■□□□□ 0.04
Thbs1P35441 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Thbs1P35441 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Thbs1P35441 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Thbs1P35441 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thbs1P35441 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Thbs1P35441 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Thbs1P35441 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thbs1P35441 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thbs1P35441 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thbs1P35441 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thbs1P35441 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thbs1P35441 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Thbs1P35441 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thbs1P35441 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.28■□□□□ 0.04
Thbs1P35441 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thbs1P35441 Gm10231-201ENSMUST00000181584 441 ntBASIC15.28■□□□□ 0.04
Thbs1P35441 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thbs1P35441 Gm10175-202ENSMUST00000208752 441 ntBASIC15.28■□□□□ 0.04
Thbs1P35441 AC153881.2-201ENSMUST00000214877 204 ntBASIC15.28■□□□□ 0.04
Thbs1P35441 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.28■□□□□ 0.04
Thbs1P35441 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thbs1P35441 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Thbs1P35441 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thbs1P35441 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thbs1P35441 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Thbs1P35441 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Thbs1P35441 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Thbs1P35441 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.28■□□□□ 0.04
Thbs1P35441 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Thbs1P35441 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Thbs1P35441 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.28■□□□□ 0.04
Thbs1P35441 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thbs1P35441 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thbs1P35441 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Thbs1P35441 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Thbs1P35441 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thbs1P35441 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Thbs1P35441 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thbs1P35441 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thbs1P35441 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thbs1P35441 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Thbs1P35441 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.27■□□□□ 0.04
Thbs1P35441 Gm13436-201ENSMUST00000120418 567 ntBASIC15.27■□□□□ 0.04
Thbs1P35441 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15.27■□□□□ 0.04
Thbs1P35441 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.27■□□□□ 0.04
Thbs1P35441 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thbs1P35441 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thbs1P35441 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Thbs1P35441 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Thbs1P35441 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Thbs1P35441 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Thbs1P35441 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.27■□□□□ 0.03
Thbs1P35441 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Thbs1P35441 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Thbs1P35441 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.27■□□□□ 0.03
Thbs1P35441 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thbs1P35441 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.26■□□□□ 0.03
Thbs1P35441 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Thbs1P35441 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thbs1P35441 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thbs1P35441 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Thbs1P35441 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.26■□□□□ 0.03
Thbs1P35441 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Thbs1P35441 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Thbs1P35441 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Thbs1P35441 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thbs1P35441 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Thbs1P35441 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms