Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp3P28862 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Mmp3P28862 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.68■□□□□ 0.42
Mmp3P28862 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp3P28862 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp3P28862 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp3P28862 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.68■□□□□ 0.42
Mmp3P28862 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Mmp3P28862 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp3P28862 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp3P28862 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Mmp3P28862 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp3P28862 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp3P28862 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp3P28862 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp3P28862 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp3P28862 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp3P28862 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp3P28862 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp3P28862 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp3P28862 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp3P28862 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.67■□□□□ 0.42
Mmp3P28862 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp3P28862 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.67■□□□□ 0.42
Mmp3P28862 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.67■□□□□ 0.42
Mmp3P28862 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp3P28862 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp3P28862 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp3P28862 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Mmp3P28862 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp3P28862 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Mmp3P28862 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp3P28862 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp3P28862 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.66■□□□□ 0.42
Mmp3P28862 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp3P28862 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp3P28862 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.66■□□□□ 0.42
Mmp3P28862 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.66■□□□□ 0.42
Mmp3P28862 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp3P28862 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.66■□□□□ 0.42
Mmp3P28862 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp3P28862 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Mmp3P28862 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Mmp3P28862 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp3P28862 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp3P28862 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp3P28862 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp3P28862 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.65■□□□□ 0.42
Mmp3P28862 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp3P28862 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp3P28862 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp3P28862 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp3P28862 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.65■□□□□ 0.42
Mmp3P28862 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.65■□□□□ 0.42
Mmp3P28862 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Mmp3P28862 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp3P28862 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp3P28862 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp3P28862 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp3P28862 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Mmp3P28862 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Mmp3P28862 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Mmp3P28862 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.42
Mmp3P28862 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp3P28862 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp3P28862 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp3P28862 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp3P28862 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.64■□□□□ 0.41
Mmp3P28862 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp3P28862 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Mmp3P28862 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
Mmp3P28862 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp3P28862 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp3P28862 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Mmp3P28862 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp3P28862 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Mmp3P28862 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
Mmp3P28862 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
Mmp3P28862 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp3P28862 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.64■□□□□ 0.41
Mmp3P28862 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.64■□□□□ 0.41
Mmp3P28862 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.64■□□□□ 0.41
Mmp3P28862 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Mmp3P28862 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp3P28862 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Mmp3P28862 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp3P28862 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp3P28862 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Mmp3P28862 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp3P28862 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp3P28862 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp3P28862 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp3P28862 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Mmp3P28862 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp3P28862 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.63■□□□□ 0.41
Mmp3P28862 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Mmp3P28862 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.63■□□□□ 0.41
Mmp3P28862 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.63■□□□□ 0.41
Mmp3P28862 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.63■□□□□ 0.41
Mmp3P28862 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms