Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cdx1P18111 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.38□□□□□ -0.27
Cdx1P18111 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdx1P18111 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdx1P18111 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdx1P18111 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdx1P18111 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdx1P18111 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdx1P18111 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdx1P18111 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.38□□□□□ -0.27
Cdx1P18111 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.38□□□□□ -0.27
Cdx1P18111 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdx1P18111 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdx1P18111 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdx1P18111 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdx1P18111 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdx1P18111 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
Cdx1P18111 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cdx1P18111 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdx1P18111 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdx1P18111 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdx1P18111 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdx1P18111 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdx1P18111 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdx1P18111 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdx1P18111 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.38□□□□□ -0.27
Cdx1P18111 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdx1P18111 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx1P18111 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx1P18111 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx1P18111 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cdx1P18111 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC13.37□□□□□ -0.27
Cdx1P18111 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx1P18111 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx1P18111 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx1P18111 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cdx1P18111 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx1P18111 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Cdx1P18111 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx1P18111 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cdx1P18111 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx1P18111 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx1P18111 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx1P18111 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx1P18111 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cdx1P18111 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.37□□□□□ -0.27
Cdx1P18111 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx1P18111 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx1P18111 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx1P18111 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx1P18111 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx1P18111 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
Cdx1P18111 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdx1P18111 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.37□□□□□ -0.27
Cdx1P18111 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx1P18111 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx1P18111 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx1P18111 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx1P18111 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx1P18111 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.36□□□□□ -0.27
Cdx1P18111 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx1P18111 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx1P18111 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.36□□□□□ -0.27
Cdx1P18111 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx1P18111 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx1P18111 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC13.36□□□□□ -0.27
Cdx1P18111 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC13.36□□□□□ -0.27
Cdx1P18111 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx1P18111 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx1P18111 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx1P18111 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.36□□□□□ -0.27
Cdx1P18111 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx1P18111 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx1P18111 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx1P18111 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx1P18111 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.36□□□□□ -0.27
Cdx1P18111 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx1P18111 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cdx1P18111 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx1P18111 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cdx1P18111 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx1P18111 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Cdx1P18111 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx1P18111 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx1P18111 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.35□□□□□ -0.27
Cdx1P18111 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx1P18111 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx1P18111 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx1P18111 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cdx1P18111 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx1P18111 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx1P18111 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cdx1P18111 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx1P18111 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cdx1P18111 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.35□□□□□ -0.27
Cdx1P18111 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cdx1P18111 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.35□□□□□ -0.27
Cdx1P18111 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.35□□□□□ -0.27
Cdx1P18111 Gm22325-201ENSMUST00000158904 308 ntBASIC13.35□□□□□ -0.27
Cdx1P18111 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms