Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmga1P17095 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmga1P17095 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmga1P17095 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmga1P17095 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmga1P17095 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Hmga1P17095 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Hmga1P17095 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Hmga1P17095 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Hmga1P17095 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hmga1P17095 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.86■□□□□ 0.29
Hmga1P17095 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Hmga1P17095 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Hmga1P17095 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga1P17095 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Hmga1P17095 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga1P17095 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga1P17095 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga1P17095 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga1P17095 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.85■□□□□ 0.29
Hmga1P17095 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Hmga1P17095 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.85■□□□□ 0.29
Hmga1P17095 Mzt1-203ENSMUST00000227948 952 ntBASIC16.85■□□□□ 0.29
Hmga1P17095 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga1P17095 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga1P17095 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga1P17095 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga1P17095 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga1P17095 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga1P17095 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga1P17095 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga1P17095 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga1P17095 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga1P17095 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hmga1P17095 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmga1P17095 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmga1P17095 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmga1P17095 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmga1P17095 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.84■□□□□ 0.29
Hmga1P17095 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hmga1P17095 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Hmga1P17095 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.84■□□□□ 0.29
Hmga1P17095 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hmga1P17095 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Hmga1P17095 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hmga1P17095 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmga1P17095 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmga1P17095 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmga1P17095 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmga1P17095 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.84■□□□□ 0.29
Hmga1P17095 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmga1P17095 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Hmga1P17095 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmga1P17095 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Hmga1P17095 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmga1P17095 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Hmga1P17095 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmga1P17095 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmga1P17095 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hmga1P17095 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hmga1P17095 Gm11452-201ENSMUST00000122376 690 ntBASIC16.83■□□□□ 0.28
Hmga1P17095 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmga1P17095 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.83■□□□□ 0.28
Hmga1P17095 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Hmga1P17095 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.83■□□□□ 0.28
Hmga1P17095 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmga1P17095 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmga1P17095 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmga1P17095 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Hmga1P17095 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmga1P17095 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmga1P17095 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Hmga1P17095 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Hmga1P17095 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmga1P17095 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmga1P17095 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hmga1P17095 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmga1P17095 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmga1P17095 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Hmga1P17095 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmga1P17095 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.82■□□□□ 0.28
Hmga1P17095 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.82■□□□□ 0.28
Hmga1P17095 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.82■□□□□ 0.28
Hmga1P17095 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmga1P17095 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmga1P17095 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmga1P17095 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmga1P17095 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmga1P17095 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Hmga1P17095 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.81■□□□□ 0.28
Hmga1P17095 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmga1P17095 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmga1P17095 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Hmga1P17095 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmga1P17095 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Hmga1P17095 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmga1P17095 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmga1P17095 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmga1P17095 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Hmga1P17095 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms