Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UbbP0CG49 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
UbbP0CG49 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UbbP0CG49 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UbbP0CG49 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
UbbP0CG49 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UbbP0CG49 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
UbbP0CG49 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UbbP0CG49 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UbbP0CG49 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.42□□□□□ -0.1
UbbP0CG49 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UbbP0CG49 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.42□□□□□ -0.1
UbbP0CG49 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UbbP0CG49 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
UbbP0CG49 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UbbP0CG49 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UbbP0CG49 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
UbbP0CG49 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.41□□□□□ -0.1
UbbP0CG49 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UbbP0CG49 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UbbP0CG49 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UbbP0CG49 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UbbP0CG49 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.41□□□□□ -0.1
UbbP0CG49 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UbbP0CG49 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC14.41□□□□□ -0.1
UbbP0CG49 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UbbP0CG49 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UbbP0CG49 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UbbP0CG49 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
UbbP0CG49 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.41□□□□□ -0.1
UbbP0CG49 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UbbP0CG49 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UbbP0CG49 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
UbbP0CG49 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UbbP0CG49 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
UbbP0CG49 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
UbbP0CG49 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UbbP0CG49 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.4□□□□□ -0.1
UbbP0CG49 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UbbP0CG49 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UbbP0CG49 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UbbP0CG49 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.4□□□□□ -0.1
UbbP0CG49 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UbbP0CG49 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UbbP0CG49 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.4□□□□□ -0.1
UbbP0CG49 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UbbP0CG49 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UbbP0CG49 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.4□□□□□ -0.1
UbbP0CG49 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UbbP0CG49 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UbbP0CG49 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC14.4□□□□□ -0.1
UbbP0CG49 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UbbP0CG49 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UbbP0CG49 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.4□□□□□ -0.1
UbbP0CG49 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UbbP0CG49 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
UbbP0CG49 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UbbP0CG49 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
UbbP0CG49 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UbbP0CG49 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UbbP0CG49 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
UbbP0CG49 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.39□□□□□ -0.11
UbbP0CG49 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UbbP0CG49 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UbbP0CG49 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.39□□□□□ -0.11
UbbP0CG49 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
UbbP0CG49 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UbbP0CG49 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UbbP0CG49 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
UbbP0CG49 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UbbP0CG49 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UbbP0CG49 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UbbP0CG49 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
UbbP0CG49 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC14.39□□□□□ -0.11
UbbP0CG49 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.39□□□□□ -0.11
UbbP0CG49 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.39□□□□□ -0.11
UbbP0CG49 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UbbP0CG49 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
UbbP0CG49 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UbbP0CG49 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.39□□□□□ -0.11
UbbP0CG49 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UbbP0CG49 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
UbbP0CG49 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UbbP0CG49 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UbbP0CG49 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UbbP0CG49 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UbbP0CG49 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UbbP0CG49 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UbbP0CG49 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
UbbP0CG49 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
UbbP0CG49 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
UbbP0CG49 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UbbP0CG49 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
UbbP0CG49 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UbbP0CG49 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UbbP0CG49 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
UbbP0CG49 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UbbP0CG49 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
UbbP0CG49 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
UbbP0CG49 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms