Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim1P0C8K7 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC11.45□□□□□ -0.58
Smim1P0C8K7 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim1P0C8K7 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim1P0C8K7 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Smim1P0C8K7 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Smim1P0C8K7 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Smim1P0C8K7 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim1P0C8K7 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim1P0C8K7 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Smim1P0C8K7 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim1P0C8K7 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim1P0C8K7 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim1P0C8K7 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim1P0C8K7 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC11.45□□□□□ -0.58
Smim1P0C8K7 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim1P0C8K7 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim1P0C8K7 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Smim1P0C8K7 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC11.45□□□□□ -0.58
Smim1P0C8K7 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim1P0C8K7 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC11.45□□□□□ -0.58
Smim1P0C8K7 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim1P0C8K7 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Smim1P0C8K7 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim1P0C8K7 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smim1P0C8K7 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim1P0C8K7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim1P0C8K7 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smim1P0C8K7 Wnt10b-204ENSMUST00000226655 1807 ntBASIC11.44□□□□□ -0.58
Smim1P0C8K7 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.44□□□□□ -0.58
Smim1P0C8K7 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC11.44□□□□□ -0.58
Smim1P0C8K7 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim1P0C8K7 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC11.44□□□□□ -0.58
Smim1P0C8K7 Gm11960-202ENSMUST00000181063 2858 ntBASIC11.44□□□□□ -0.58
Smim1P0C8K7 App-207ENSMUST00000227737 2827 ntBASIC11.44□□□□□ -0.58
Smim1P0C8K7 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim1P0C8K7 Gm45133-201ENSMUST00000207548 2773 ntBASIC11.44□□□□□ -0.58
Smim1P0C8K7 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim1P0C8K7 Gm13401-201ENSMUST00000117074 291 ntBASIC11.44□□□□□ -0.58
Smim1P0C8K7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC11.44□□□□□ -0.58
Smim1P0C8K7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smim1P0C8K7 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim1P0C8K7 Golgb1-201ENSMUST00000023534 498 ntBASIC11.44□□□□□ -0.58
Smim1P0C8K7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim1P0C8K7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Smim1P0C8K7 Gm9847-201ENSMUST00000052528 599 ntBASIC11.44□□□□□ -0.58
Smim1P0C8K7 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim1P0C8K7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim1P0C8K7 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Smim1P0C8K7 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim1P0C8K7 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Smim1P0C8K7 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Smim1P0C8K7 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim1P0C8K7 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Smim1P0C8K7 AL590614.2-201ENSMUST00000225374 1937 ntBASIC11.44□□□□□ -0.58
Smim1P0C8K7 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim1P0C8K7 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim1P0C8K7 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC11.44□□□□□ -0.58
Smim1P0C8K7 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Smim1P0C8K7 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim1P0C8K7 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim1P0C8K7 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim1P0C8K7 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim1P0C8K7 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim1P0C8K7 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim1P0C8K7 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smim1P0C8K7 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim1P0C8K7 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim1P0C8K7 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smim1P0C8K7 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Smim1P0C8K7 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smim1P0C8K7 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smim1P0C8K7 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smim1P0C8K7 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smim1P0C8K7 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smim1P0C8K7 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smim1P0C8K7 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smim1P0C8K7 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC11.43□□□□□ -0.58
Smim1P0C8K7 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Smim1P0C8K7 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smim1P0C8K7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smim1P0C8K7 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Smim1P0C8K7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smim1P0C8K7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smim1P0C8K7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smim1P0C8K7 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Smim1P0C8K7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Smim1P0C8K7 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smim1P0C8K7 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smim1P0C8K7 Gm42901-201ENSMUST00000197735 3171 ntBASIC11.43□□□□□ -0.58
Smim1P0C8K7 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smim1P0C8K7 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smim1P0C8K7 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC11.43□□□□□ -0.58
Smim1P0C8K7 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smim1P0C8K7 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smim1P0C8K7 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smim1P0C8K7 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smim1P0C8K7 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Smim1P0C8K7 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Smim1P0C8K7 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms