Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hoxc9P09633 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hoxc9P09633 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hoxc9P09633 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hoxc9P09633 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Hoxc9P09633 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Hoxc9P09633 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hoxc9P09633 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hoxc9P09633 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC21.41■■□□□ 1.02
Hoxc9P09633 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC21.41■■□□□ 1.02
Hoxc9P09633 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Hoxc9P09633 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Hoxc9P09633 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Hoxc9P09633 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC21.41■■□□□ 1.02
Hoxc9P09633 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC21.41■■□□□ 1.02
Hoxc9P09633 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hoxc9P09633 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC21.41■■□□□ 1.02
Hoxc9P09633 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC21.41■■□□□ 1.02
Hoxc9P09633 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC21.41■■□□□ 1.02
Hoxc9P09633 Gm6089-201ENSMUST00000197666 938 ntBASIC21.41■■□□□ 1.02
Hoxc9P09633 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hoxc9P09633 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC21.41■■□□□ 1.02
Hoxc9P09633 Psmb5-202ENSMUST00000227257 622 ntBASIC21.41■■□□□ 1.02
Hoxc9P09633 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hoxc9P09633 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Hoxc9P09633 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
Hoxc9P09633 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hoxc9P09633 Gm25925-201ENSMUST00000158314 306 ntBASIC21.4■■□□□ 1.02
Hoxc9P09633 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC21.4■■□□□ 1.02
Hoxc9P09633 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Hoxc9P09633 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hoxc9P09633 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Hoxc9P09633 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Hoxc9P09633 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Hoxc9P09633 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Hoxc9P09633 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Hoxc9P09633 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC21.39■■□□□ 1.01
Hoxc9P09633 Gm11594-201ENSMUST00000122313 162 ntBASIC21.39■■□□□ 1.01
Hoxc9P09633 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC21.39■■□□□ 1.01
Hoxc9P09633 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC21.39■■□□□ 1.01
Hoxc9P09633 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Hoxc9P09633 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC21.39■■□□□ 1.01
Hoxc9P09633 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hoxc9P09633 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hoxc9P09633 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hoxc9P09633 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Hoxc9P09633 Gm15590-201ENSMUST00000078419 552 ntBASIC21.39■■□□□ 1.01
Hoxc9P09633 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hoxc9P09633 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hoxc9P09633 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hoxc9P09633 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Hoxc9P09633 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
Hoxc9P09633 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hoxc9P09633 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hoxc9P09633 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Hoxc9P09633 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hoxc9P09633 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hoxc9P09633 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Hoxc9P09633 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC21.38■■□□□ 1.01
Hoxc9P09633 Gm25406-201ENSMUST00000157599 105 ntBASIC21.38■■□□□ 1.01
Hoxc9P09633 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC21.38■■□□□ 1.01
Hoxc9P09633 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hoxc9P09633 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
Hoxc9P09633 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Hoxc9P09633 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Hoxc9P09633 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hoxc9P09633 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Hoxc9P09633 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hoxc9P09633 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hoxc9P09633 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Hoxc9P09633 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Hoxc9P09633 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hoxc9P09633 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hoxc9P09633 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Hoxc9P09633 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC21.37■■□□□ 1.01
Hoxc9P09633 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Hoxc9P09633 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hoxc9P09633 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hoxc9P09633 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hoxc9P09633 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hoxc9P09633 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hoxc9P09633 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC21.36■■□□□ 1.01
Hoxc9P09633 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hoxc9P09633 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
Hoxc9P09633 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC21.36■■□□□ 1.01
Hoxc9P09633 Gm6550-201ENSMUST00000187574 993 ntBASIC21.36■■□□□ 1.01
Hoxc9P09633 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Hoxc9P09633 AV026068-213ENSMUST00000223675 1171 ntBASIC21.36■■□□□ 1.01
Hoxc9P09633 AC159093.1-201ENSMUST00000227779 380 ntBASIC21.36■■□□□ 1.01
Hoxc9P09633 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hoxc9P09633 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hoxc9P09633 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hoxc9P09633 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Hoxc9P09633 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Hoxc9P09633 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hoxc9P09633 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Hoxc9P09633 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hoxc9P09633 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Hoxc9P09633 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Hoxc9P09633 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms