Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
P04214 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P04214 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04214 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04214 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04214 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.28■□□□□ 0.36
P04214 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.28■□□□□ 0.36
P04214 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04214 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.28■□□□□ 0.36
P04214 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P04214 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.28■□□□□ 0.36
P04214 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P04214 Gm10576-201ENSMUST00000191927 825 ntBASIC17.28■□□□□ 0.36
P04214 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P04214 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04214 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.28■□□□□ 0.36
P04214 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04214 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04214 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04214 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04214 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
P04214 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04214 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04214 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
P04214 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
P04214 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
P04214 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
P04214 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.27■□□□□ 0.36
P04214 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.27■□□□□ 0.36
P04214 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
P04214 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
P04214 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.27■□□□□ 0.36
P04214 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
P04214 Mir3113-201ENSMUST00000175478 76 ntBASIC17.27■□□□□ 0.36
P04214 Auts2-212ENSMUST00000178555 309 ntBASIC17.27■□□□□ 0.36
P04214 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.27■□□□□ 0.36
P04214 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
P04214 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.27■□□□□ 0.36
P04214 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
P04214 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
P04214 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
P04214 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.27■□□□□ 0.35
P04214 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
P04214 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
P04214 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04214 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
P04214 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.26■□□□□ 0.35
P04214 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
P04214 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.26■□□□□ 0.35
P04214 Mir8117-201ENSMUST00000184773 107 ntBASIC17.26■□□□□ 0.35
P04214 Gm36967-201ENSMUST00000193814 266 ntBASIC17.26■□□□□ 0.35
P04214 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
P04214 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
P04214 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04214 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.25■□□□□ 0.35
P04214 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04214 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04214 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04214 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.25■□□□□ 0.35
P04214 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04214 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.25■□□□□ 0.35
P04214 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
P04214 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04214 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04214 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.25■□□□□ 0.35
P04214 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04214 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.25■□□□□ 0.35
P04214 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.25■□□□□ 0.35
P04214 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
P04214 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.25■□□□□ 0.35
P04214 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04214 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04214 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04214 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.25■□□□□ 0.35
P04214 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04214 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04214 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04214 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
P04214 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.24■□□□□ 0.35
P04214 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
P04214 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04214 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
P04214 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04214 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04214 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04214 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
P04214 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.24■□□□□ 0.35
P04214 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.24■□□□□ 0.35
P04214 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.24■□□□□ 0.35
P04214 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.24■□□□□ 0.35
P04214 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04214 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17.24■□□□□ 0.35
P04214 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04214 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04214 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04214 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04214 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04214 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
P04214 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
P04214 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms