Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
TcraP01849 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
TcraP01849 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TcraP01849 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.14□□□□□ -0.47
TcraP01849 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TcraP01849 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TcraP01849 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
TcraP01849 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TcraP01849 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TcraP01849 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TcraP01849 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TcraP01849 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TcraP01849 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TcraP01849 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
TcraP01849 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TcraP01849 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TcraP01849 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TcraP01849 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TcraP01849 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TcraP01849 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
TcraP01849 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TcraP01849 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.13□□□□□ -0.47
TcraP01849 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TcraP01849 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
TcraP01849 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TcraP01849 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
TcraP01849 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC12.13□□□□□ -0.47
TcraP01849 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TcraP01849 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC12.13□□□□□ -0.47
TcraP01849 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
TcraP01849 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.13□□□□□ -0.47
TcraP01849 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TcraP01849 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TcraP01849 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TcraP01849 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TcraP01849 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
TcraP01849 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
TcraP01849 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC12.13□□□□□ -0.47
TcraP01849 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TcraP01849 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TcraP01849 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
TcraP01849 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TcraP01849 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TcraP01849 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
TcraP01849 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TcraP01849 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TcraP01849 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.12□□□□□ -0.47
TcraP01849 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TcraP01849 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.12□□□□□ -0.47
TcraP01849 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TcraP01849 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
TcraP01849 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC12.12□□□□□ -0.47
TcraP01849 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TcraP01849 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TcraP01849 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
TcraP01849 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TcraP01849 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TcraP01849 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
TcraP01849 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TcraP01849 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TcraP01849 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
TcraP01849 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TcraP01849 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
TcraP01849 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TcraP01849 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TcraP01849 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TcraP01849 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
TcraP01849 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
TcraP01849 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
TcraP01849 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC12.11□□□□□ -0.47
TcraP01849 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TcraP01849 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TcraP01849 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TcraP01849 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TcraP01849 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TcraP01849 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
TcraP01849 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.11□□□□□ -0.47
TcraP01849 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TcraP01849 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TcraP01849 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
TcraP01849 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TcraP01849 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TcraP01849 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TcraP01849 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TcraP01849 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.11□□□□□ -0.47
TcraP01849 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TcraP01849 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
TcraP01849 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
TcraP01849 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC12.11□□□□□ -0.47
TcraP01849 Gm18284-201ENSMUST00000172604 624 ntBASIC12.11□□□□□ -0.47
TcraP01849 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
TcraP01849 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TcraP01849 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TcraP01849 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TcraP01849 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC12.11□□□□□ -0.47
TcraP01849 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TcraP01849 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
TcraP01849 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
TcraP01849 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TcraP01849 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms