Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
P01788 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P01788 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P01788 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
P01788 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
P01788 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
P01788 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P01788 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P01788 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P01788 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P01788 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P01788 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P01788 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.11□□□□□ -0.31
P01788 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
P01788 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P01788 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.11□□□□□ -0.31
P01788 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.11□□□□□ -0.31
P01788 Gm27000-201ENSMUST00000182943 842 ntBASIC13.11□□□□□ -0.31
P01788 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
P01788 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P01788 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P01788 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P01788 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P01788 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P01788 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P01788 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.11□□□□□ -0.31
P01788 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.11□□□□□ -0.31
P01788 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P01788 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
P01788 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
P01788 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
P01788 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P01788 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
P01788 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
P01788 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
P01788 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
P01788 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
P01788 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.1□□□□□ -0.31
P01788 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P01788 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P01788 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.1□□□□□ -0.31
P01788 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
P01788 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P01788 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
P01788 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
P01788 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
P01788 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P01788 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P01788 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
P01788 Gm37025-201ENSMUST00000195159 829 ntBASIC13.1□□□□□ -0.31
P01788 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P01788 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P01788 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
P01788 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P01788 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
P01788 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
P01788 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01788 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
P01788 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01788 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
P01788 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P01788 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01788 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01788 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01788 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01788 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01788 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
P01788 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01788 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
P01788 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.09□□□□□ -0.31
P01788 Gm18666-201ENSMUST00000190039 958 ntBASIC13.09□□□□□ -0.31
P01788 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01788 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01788 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01788 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01788 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01788 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
P01788 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01788 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01788 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
P01788 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
P01788 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
P01788 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
P01788 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01788 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01788 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01788 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01788 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01788 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
P01788 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
P01788 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01788 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01788 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
P01788 Gm12085-201ENSMUST00000119263 940 ntBASIC13.08□□□□□ -0.32
P01788 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.08□□□□□ -0.32
P01788 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
P01788 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01788 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.08□□□□□ -0.32
P01788 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
P01788 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms