Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Matn4O89029 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Matn4O89029 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Matn4O89029 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Matn4O89029 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Matn4O89029 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Matn4O89029 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Matn4O89029 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Matn4O89029 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Matn4O89029 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Matn4O89029 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Matn4O89029 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Matn4O89029 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.63■□□□□ 0.09
Matn4O89029 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.62■□□□□ 0.09
Matn4O89029 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Matn4O89029 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Matn4O89029 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Matn4O89029 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Matn4O89029 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Matn4O89029 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Matn4O89029 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Matn4O89029 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Matn4O89029 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Matn4O89029 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Matn4O89029 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Matn4O89029 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC15.62■□□□□ 0.09
Matn4O89029 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Matn4O89029 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.62■□□□□ 0.09
Matn4O89029 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.62■□□□□ 0.09
Matn4O89029 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Matn4O89029 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Matn4O89029 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Matn4O89029 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Matn4O89029 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Matn4O89029 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Matn4O89029 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Matn4O89029 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Matn4O89029 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Matn4O89029 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Matn4O89029 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Matn4O89029 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Matn4O89029 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Matn4O89029 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Matn4O89029 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Matn4O89029 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.61■□□□□ 0.09
Matn4O89029 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Matn4O89029 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Matn4O89029 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Matn4O89029 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Matn4O89029 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Matn4O89029 Actl10-202ENSMUST00000226583 1501 ntBASIC15.61■□□□□ 0.09
Matn4O89029 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Matn4O89029 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Matn4O89029 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Matn4O89029 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Matn4O89029 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.61■□□□□ 0.09
Matn4O89029 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Matn4O89029 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Matn4O89029 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Matn4O89029 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Matn4O89029 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Matn4O89029 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Matn4O89029 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Matn4O89029 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Matn4O89029 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Matn4O89029 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Matn4O89029 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Matn4O89029 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Matn4O89029 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Matn4O89029 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Matn4O89029 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Matn4O89029 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Matn4O89029 Gm16042-201ENSMUST00000204813 1247 ntBASIC15.6■□□□□ 0.09
Matn4O89029 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.6■□□□□ 0.09
Matn4O89029 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Matn4O89029 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Matn4O89029 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.6■□□□□ 0.09
Matn4O89029 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Matn4O89029 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Matn4O89029 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Matn4O89029 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.6■□□□□ 0.09
Matn4O89029 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Matn4O89029 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Matn4O89029 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Matn4O89029 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Matn4O89029 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Matn4O89029 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Matn4O89029 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Matn4O89029 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Matn4O89029 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Matn4O89029 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Matn4O89029 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Matn4O89029 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Matn4O89029 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Matn4O89029 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Matn4O89029 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Matn4O89029 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Matn4O89029 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Matn4O89029 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Matn4O89029 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms