Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.01■□□□□ 0.31
Syn1O88935 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Syn1O88935 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Syn1O88935 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Syn1O88935 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Syn1O88935 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Syn1O88935 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17■□□□□ 0.31
Syn1O88935 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17■□□□□ 0.31
Syn1O88935 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Syn1O88935 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17■□□□□ 0.31
Syn1O88935 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Syn1O88935 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17■□□□□ 0.31
Syn1O88935 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17■□□□□ 0.31
Syn1O88935 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17■□□□□ 0.31
Syn1O88935 Chchd1-203ENSMUST00000224633 557 ntBASIC17■□□□□ 0.31
Syn1O88935 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Syn1O88935 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Syn1O88935 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Syn1O88935 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Syn1O88935 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Syn1O88935 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Syn1O88935 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Syn1O88935 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.99■□□□□ 0.31
Syn1O88935 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Syn1O88935 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Syn1O88935 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Syn1O88935 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Syn1O88935 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Syn1O88935 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Syn1O88935 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Syn1O88935 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Syn1O88935 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.99■□□□□ 0.31
Syn1O88935 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Syn1O88935 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Syn1O88935 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.99■□□□□ 0.31
Syn1O88935 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Syn1O88935 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Syn1O88935 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Syn1O88935 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Syn1O88935 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Syn1O88935 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Syn1O88935 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Syn1O88935 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Syn1O88935 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Syn1O88935 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.98■□□□□ 0.31
Syn1O88935 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Syn1O88935 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.98■□□□□ 0.31
Syn1O88935 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.98■□□□□ 0.31
Syn1O88935 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.98■□□□□ 0.31
Syn1O88935 Mir3113-201ENSMUST00000175478 76 ntBASIC16.98■□□□□ 0.31
Syn1O88935 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.98■□□□□ 0.31
Syn1O88935 Gm44872-201ENSMUST00000207864 420 ntBASIC16.98■□□□□ 0.31
Syn1O88935 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Syn1O88935 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Syn1O88935 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Syn1O88935 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Syn1O88935 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Syn1O88935 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Syn1O88935 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.98■□□□□ 0.31
Syn1O88935 Fam105a-203ENSMUST00000226170 3043 ntBASIC16.98■□□□□ 0.31
Syn1O88935 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Syn1O88935 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.98■□□□□ 0.31
Syn1O88935 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Syn1O88935 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Syn1O88935 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Syn1O88935 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Syn1O88935 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Syn1O88935 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Syn1O88935 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Syn1O88935 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.97■□□□□ 0.31
Syn1O88935 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.97■□□□□ 0.31
Syn1O88935 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Syn1O88935 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Syn1O88935 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC16.97■□□□□ 0.31
Syn1O88935 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Syn1O88935 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Syn1O88935 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Syn1O88935 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Syn1O88935 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Syn1O88935 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Syn1O88935 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Syn1O88935 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Syn1O88935 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Syn1O88935 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Syn1O88935 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Syn1O88935 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Syn1O88935 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Syn1O88935 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.96■□□□□ 0.31
Syn1O88935 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Syn1O88935 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.96■□□□□ 0.31
Syn1O88935 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Syn1O88935 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Syn1O88935 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Syn1O88935 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Syn1O88935 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Syn1O88935 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Syn1O88935 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Syn1O88935 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Syn1O88935 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Syn1O88935 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms