Protein–RNA interactions for Protein: O88623

Usp2, Ubiquitin carboxyl-terminal hydrolase 2, mousemouse

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp2O88623 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp2O88623 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp2O88623 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp2O88623 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp2O88623 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Usp2O88623 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.82■□□□□ 0.28
Usp2O88623 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.82■□□□□ 0.28
Usp2O88623 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Usp2O88623 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.82■□□□□ 0.28
Usp2O88623 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp2O88623 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp2O88623 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Usp2O88623 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp2O88623 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp2O88623 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp2O88623 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp2O88623 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp2O88623 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp2O88623 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp2O88623 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp2O88623 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp2O88623 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp2O88623 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp2O88623 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp2O88623 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp2O88623 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.81■□□□□ 0.28
Usp2O88623 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp2O88623 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Usp2O88623 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Usp2O88623 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp2O88623 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Usp2O88623 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.81■□□□□ 0.28
Usp2O88623 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Usp2O88623 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp2O88623 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.81■□□□□ 0.28
Usp2O88623 Gm10052-201ENSMUST00000168019 960 ntBASIC16.81■□□□□ 0.28
Usp2O88623 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp2O88623 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp2O88623 Gm7729-201ENSMUST00000050143 801 ntBASIC16.81■□□□□ 0.28
Usp2O88623 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.81■□□□□ 0.28
Usp2O88623 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp2O88623 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp2O88623 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp2O88623 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Usp2O88623 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp2O88623 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp2O88623 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp2O88623 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Usp2O88623 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Usp2O88623 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp2O88623 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Usp2O88623 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp2O88623 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Usp2O88623 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp2O88623 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp2O88623 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Usp2O88623 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp2O88623 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp2O88623 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp2O88623 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp2O88623 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp2O88623 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Usp2O88623 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp2O88623 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp2O88623 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp2O88623 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Usp2O88623 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Usp2O88623 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp2O88623 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp2O88623 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Usp2O88623 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.79■□□□□ 0.28
Usp2O88623 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Usp2O88623 Umpk-ps-201ENSMUST00000211897 827 ntBASIC16.79■□□□□ 0.28
Usp2O88623 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp2O88623 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp2O88623 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.79■□□□□ 0.28
Usp2O88623 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp2O88623 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp2O88623 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp2O88623 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.78■□□□□ 0.28
Usp2O88623 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp2O88623 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp2O88623 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Usp2O88623 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp2O88623 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Usp2O88623 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.78■□□□□ 0.28
Usp2O88623 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Usp2O88623 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.78■□□□□ 0.28
Usp2O88623 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.78■□□□□ 0.28
Usp2O88623 Gm44430-201ENSMUST00000203376 995 ntBASIC16.78■□□□□ 0.28
Usp2O88623 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp2O88623 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp2O88623 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp2O88623 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp2O88623 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp2O88623 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp2O88623 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Usp2O88623 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.78■□□□□ 0.28
Usp2O88623 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Usp2O88623 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms