Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a20bO88575 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a20bO88575 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a20bO88575 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a20bO88575 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a20bO88575 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a20bO88575 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.02■□□□□ 0.48
Slc6a20bO88575 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a20bO88575 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.02■□□□□ 0.48
Slc6a20bO88575 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a20bO88575 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.02■□□□□ 0.48
Slc6a20bO88575 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a20bO88575 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Slc6a20bO88575 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slc6a20bO88575 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Slc6a20bO88575 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slc6a20bO88575 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Slc6a20bO88575 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a20bO88575 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.01■□□□□ 0.47
Slc6a20bO88575 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a20bO88575 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a20bO88575 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Slc6a20bO88575 Gm12497-201ENSMUST00000138778 237 ntBASIC18.01■□□□□ 0.47
Slc6a20bO88575 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.01■□□□□ 0.47
Slc6a20bO88575 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC18.01■□□□□ 0.47
Slc6a20bO88575 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a20bO88575 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a20bO88575 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a20bO88575 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Slc6a20bO88575 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a20bO88575 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.01■□□□□ 0.47
Slc6a20bO88575 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a20bO88575 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Slc6a20bO88575 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a20bO88575 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Slc6a20bO88575 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a20bO88575 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Slc6a20bO88575 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18■□□□□ 0.47
Slc6a20bO88575 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a20bO88575 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a20bO88575 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Slc6a20bO88575 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a20bO88575 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Slc6a20bO88575 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Slc6a20bO88575 Gm15920-201ENSMUST00000118998 402 ntBASIC18■□□□□ 0.47
Slc6a20bO88575 H2af-ps-201ENSMUST00000119066 295 ntBASIC18■□□□□ 0.47
Slc6a20bO88575 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a20bO88575 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18■□□□□ 0.47
Slc6a20bO88575 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC18■□□□□ 0.47
Slc6a20bO88575 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC18■□□□□ 0.47
Slc6a20bO88575 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a20bO88575 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Slc6a20bO88575 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18■□□□□ 0.47
Slc6a20bO88575 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18■□□□□ 0.47
Slc6a20bO88575 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a20bO88575 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a20bO88575 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a20bO88575 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a20bO88575 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Slc6a20bO88575 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a20bO88575 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a20bO88575 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a20bO88575 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.99■□□□□ 0.47
Slc6a20bO88575 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a20bO88575 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a20bO88575 Gm8655-201ENSMUST00000221159 852 ntBASIC17.99■□□□□ 0.47
Slc6a20bO88575 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a20bO88575 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a20bO88575 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a20bO88575 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a20bO88575 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Slc6a20bO88575 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a20bO88575 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a20bO88575 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Slc6a20bO88575 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.98■□□□□ 0.47
Slc6a20bO88575 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.98■□□□□ 0.47
Slc6a20bO88575 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a20bO88575 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Slc6a20bO88575 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a20bO88575 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a20bO88575 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a20bO88575 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a20bO88575 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.98■□□□□ 0.47
Slc6a20bO88575 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a20bO88575 Mir3113-201ENSMUST00000175478 76 ntBASIC17.98■□□□□ 0.47
Slc6a20bO88575 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a20bO88575 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Slc6a20bO88575 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a20bO88575 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Slc6a20bO88575 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a20bO88575 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a20bO88575 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a20bO88575 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Slc6a20bO88575 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a20bO88575 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a20bO88575 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.98■□□□□ 0.47
Slc6a20bO88575 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Slc6a20bO88575 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a20bO88575 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Slc6a20bO88575 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms