Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cops3O88543 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cops3O88543 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cops3O88543 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cops3O88543 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cops3O88543 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cops3O88543 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cops3O88543 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cops3O88543 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cops3O88543 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cops3O88543 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cops3O88543 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cops3O88543 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
Cops3O88543 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cops3O88543 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cops3O88543 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cops3O88543 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.84□□□□□ -0.03
Cops3O88543 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Cops3O88543 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Cops3O88543 Gm5643-201ENSMUST00000117081 966 ntBASIC14.84□□□□□ -0.03
Cops3O88543 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.84□□□□□ -0.03
Cops3O88543 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cops3O88543 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cops3O88543 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cops3O88543 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cops3O88543 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Cops3O88543 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cops3O88543 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Cops3O88543 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cops3O88543 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cops3O88543 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cops3O88543 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cops3O88543 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.83□□□□□ -0.03
Cops3O88543 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cops3O88543 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cops3O88543 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cops3O88543 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Cops3O88543 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cops3O88543 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cops3O88543 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cops3O88543 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Cops3O88543 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cops3O88543 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Cops3O88543 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cops3O88543 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Cops3O88543 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.83□□□□□ -0.04
Cops3O88543 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
Cops3O88543 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cops3O88543 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.82□□□□□ -0.04
Cops3O88543 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cops3O88543 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cops3O88543 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cops3O88543 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cops3O88543 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cops3O88543 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cops3O88543 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cops3O88543 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cops3O88543 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cops3O88543 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cops3O88543 Gm12085-201ENSMUST00000119263 940 ntBASIC14.82□□□□□ -0.04
Cops3O88543 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cops3O88543 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.82□□□□□ -0.04
Cops3O88543 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC14.82□□□□□ -0.04
Cops3O88543 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.82□□□□□ -0.04
Cops3O88543 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cops3O88543 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cops3O88543 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.82□□□□□ -0.04
Cops3O88543 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cops3O88543 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cops3O88543 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cops3O88543 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cops3O88543 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cops3O88543 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cops3O88543 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cops3O88543 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cops3O88543 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cops3O88543 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cops3O88543 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Cops3O88543 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cops3O88543 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cops3O88543 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cops3O88543 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cops3O88543 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cops3O88543 Gm9731-201ENSMUST00000209480 747 ntBASIC14.81□□□□□ -0.04
Cops3O88543 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cops3O88543 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cops3O88543 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cops3O88543 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cops3O88543 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cops3O88543 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cops3O88543 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cops3O88543 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cops3O88543 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cops3O88543 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cops3O88543 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cops3O88543 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cops3O88543 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cops3O88543 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cops3O88543 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Cops3O88543 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms