Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna1hO88427 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Cacna1hO88427 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Cacna1hO88427 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.05■□□□□ 0.16
Cacna1hO88427 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna1hO88427 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna1hO88427 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna1hO88427 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna1hO88427 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.05■□□□□ 0.16
Cacna1hO88427 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna1hO88427 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna1hO88427 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna1hO88427 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna1hO88427 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna1hO88427 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cacna1hO88427 Gm17968-201ENSMUST00000194902 784 ntBASIC16.05■□□□□ 0.16
Cacna1hO88427 Gm43474-201ENSMUST00000196415 774 ntBASIC16.05■□□□□ 0.16
Cacna1hO88427 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.05■□□□□ 0.16
Cacna1hO88427 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Cacna1hO88427 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Cacna1hO88427 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1hO88427 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1hO88427 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1hO88427 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1hO88427 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1hO88427 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.04■□□□□ 0.16
Cacna1hO88427 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1hO88427 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Cacna1hO88427 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1hO88427 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1hO88427 Gm27306-201ENSMUST00000183970 107 ntBASIC16.04■□□□□ 0.16
Cacna1hO88427 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1hO88427 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC16.04■□□□□ 0.16
Cacna1hO88427 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1hO88427 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1hO88427 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1hO88427 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1hO88427 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1hO88427 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1hO88427 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1hO88427 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1hO88427 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1hO88427 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1hO88427 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1hO88427 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Cacna1hO88427 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1hO88427 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1hO88427 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Cacna1hO88427 Gm25406-201ENSMUST00000157599 105 ntBASIC16.04■□□□□ 0.16
Cacna1hO88427 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1hO88427 Mir6990-201ENSMUST00000183724 91 ntBASIC16.04■□□□□ 0.16
Cacna1hO88427 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.04■□□□□ 0.16
Cacna1hO88427 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC16.04■□□□□ 0.16
Cacna1hO88427 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cacna1hO88427 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1hO88427 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.03■□□□□ 0.16
Cacna1hO88427 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Cacna1hO88427 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Cacna1hO88427 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1hO88427 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Cacna1hO88427 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1hO88427 Gm27622-201ENSMUST00000183779 60 ntBASIC16.03■□□□□ 0.16
Cacna1hO88427 Gm18187-201ENSMUST00000196476 984 ntBASIC16.03■□□□□ 0.16
Cacna1hO88427 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1hO88427 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1hO88427 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1hO88427 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1hO88427 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1hO88427 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cacna1hO88427 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Cacna1hO88427 Gm11745-201ENSMUST00000121669 448 ntBASIC16.02■□□□□ 0.16
Cacna1hO88427 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.02■□□□□ 0.16
Cacna1hO88427 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC16.02■□□□□ 0.16
Cacna1hO88427 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.02■□□□□ 0.16
Cacna1hO88427 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Cacna1hO88427 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna1hO88427 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cacna1hO88427 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cacna1hO88427 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cacna1hO88427 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Cacna1hO88427 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.02■□□□□ 0.15
Cacna1hO88427 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Cacna1hO88427 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
Cacna1hO88427 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cacna1hO88427 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Cacna1hO88427 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Cacna1hO88427 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cacna1hO88427 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1hO88427 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC16.01■□□□□ 0.15
Cacna1hO88427 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.01■□□□□ 0.15
Cacna1hO88427 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1hO88427 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.01■□□□□ 0.15
Cacna1hO88427 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.01■□□□□ 0.15
Cacna1hO88427 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1hO88427 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1hO88427 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Cacna1hO88427 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1hO88427 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cacna1hO88427 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.01■□□□□ 0.15
Cacna1hO88427 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms