Protein–RNA interactions for Protein: O88245

Gm10139, Mszf85 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10139O88245 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm10139O88245 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm10139O88245 Gm13186-201ENSMUST00000118031 316 ntBASIC10.09□□□□□ -0.79
Gm10139O88245 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC10.09□□□□□ -0.79
Gm10139O88245 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
Gm10139O88245 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Gm10139O88245 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Gm10139O88245 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC10.09□□□□□ -0.79
Gm10139O88245 AC159205.3-201ENSMUST00000224614 874 ntBASIC10.09□□□□□ -0.79
Gm10139O88245 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm10139O88245 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm10139O88245 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC10.09□□□□□ -0.79
Gm10139O88245 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm10139O88245 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm10139O88245 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Gm10139O88245 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm10139O88245 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Gm10139O88245 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm10139O88245 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm10139O88245 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Gm10139O88245 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC10.09□□□□□ -0.79
Gm10139O88245 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10139O88245 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10139O88245 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10139O88245 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10139O88245 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10139O88245 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC10.08□□□□□ -0.8
Gm10139O88245 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10139O88245 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10139O88245 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Gm10139O88245 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC10.08□□□□□ -0.8
Gm10139O88245 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10139O88245 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10139O88245 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10139O88245 Gm715-201ENSMUST00000117865 831 ntBASIC10.08□□□□□ -0.8
Gm10139O88245 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC10.08□□□□□ -0.8
Gm10139O88245 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10139O88245 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC10.08□□□□□ -0.8
Gm10139O88245 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10139O88245 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10139O88245 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10139O88245 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10139O88245 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10139O88245 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC10.08□□□□□ -0.8
Gm10139O88245 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Gm10139O88245 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10139O88245 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10139O88245 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10139O88245 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC10.08□□□□□ -0.8
Gm10139O88245 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10139O88245 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Gm10139O88245 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm10139O88245 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Gm10139O88245 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Gm10139O88245 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC10.07□□□□□ -0.8
Gm10139O88245 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10139O88245 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Gm10139O88245 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10139O88245 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10139O88245 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10139O88245 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10139O88245 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC10.07□□□□□ -0.8
Gm10139O88245 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10139O88245 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10139O88245 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10139O88245 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10139O88245 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC10.07□□□□□ -0.8
Gm10139O88245 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10139O88245 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10139O88245 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10139O88245 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC10.07□□□□□ -0.8
Gm10139O88245 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC10.07□□□□□ -0.8
Gm10139O88245 Gm12669-201ENSMUST00000122162 1009 ntBASIC10.07□□□□□ -0.8
Gm10139O88245 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10139O88245 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC10.07□□□□□ -0.8
Gm10139O88245 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC10.07□□□□□ -0.8
Gm10139O88245 Gm21814-202ENSMUST00000203277 873 ntBASIC10.07□□□□□ -0.8
Gm10139O88245 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10139O88245 Arhgef4-208ENSMUST00000211073 171 ntBASIC10.07□□□□□ -0.8
Gm10139O88245 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10139O88245 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10139O88245 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10139O88245 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10139O88245 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10139O88245 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC10.07□□□□□ -0.8
Gm10139O88245 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10139O88245 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10139O88245 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10139O88245 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10139O88245 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10139O88245 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10139O88245 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10139O88245 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm10139O88245 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10139O88245 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10139O88245 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10139O88245 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm10139O88245 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Gm10139O88245 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Gm10139O88245 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms