Protein–RNA interactions for Protein: O70401

Tspan6, Tetraspanin-6, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan6O70401 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tspan6O70401 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Tspan6O70401 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tspan6O70401 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Tspan6O70401 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tspan6O70401 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tspan6O70401 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tspan6O70401 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Tspan6O70401 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.11■□□□□ 0.17
Tspan6O70401 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.11■□□□□ 0.17
Tspan6O70401 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tspan6O70401 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Tspan6O70401 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
Tspan6O70401 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tspan6O70401 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.11■□□□□ 0.17
Tspan6O70401 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
Tspan6O70401 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tspan6O70401 Rps4l-201ENSMUST00000071745 943 ntBASIC16.11■□□□□ 0.17
Tspan6O70401 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tspan6O70401 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tspan6O70401 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tspan6O70401 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Tspan6O70401 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tspan6O70401 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tspan6O70401 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tspan6O70401 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Tspan6O70401 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Tspan6O70401 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Tspan6O70401 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Tspan6O70401 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Tspan6O70401 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tspan6O70401 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Tspan6O70401 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Tspan6O70401 Gm11452-201ENSMUST00000122376 690 ntBASIC16.1■□□□□ 0.17
Tspan6O70401 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tspan6O70401 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.1■□□□□ 0.17
Tspan6O70401 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tspan6O70401 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.1■□□□□ 0.17
Tspan6O70401 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Tspan6O70401 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Tspan6O70401 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Tspan6O70401 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Tspan6O70401 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tspan6O70401 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Tspan6O70401 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tspan6O70401 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Tspan6O70401 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tspan6O70401 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tspan6O70401 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.09■□□□□ 0.17
Tspan6O70401 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.09■□□□□ 0.17
Tspan6O70401 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tspan6O70401 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tspan6O70401 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
Tspan6O70401 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tspan6O70401 Gm6443-201ENSMUST00000203599 874 ntBASIC16.09■□□□□ 0.17
Tspan6O70401 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tspan6O70401 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tspan6O70401 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tspan6O70401 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.09■□□□□ 0.17
Tspan6O70401 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Tspan6O70401 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.09■□□□□ 0.17
Tspan6O70401 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.08■□□□□ 0.17
Tspan6O70401 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Tspan6O70401 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tspan6O70401 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Tspan6O70401 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tspan6O70401 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tspan6O70401 Gm18733-201ENSMUST00000173950 856 ntBASIC16.08■□□□□ 0.16
Tspan6O70401 Gm27867-201ENSMUST00000184778 125 ntBASIC16.08■□□□□ 0.16
Tspan6O70401 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Tspan6O70401 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.08■□□□□ 0.16
Tspan6O70401 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.08■□□□□ 0.16
Tspan6O70401 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.08■□□□□ 0.16
Tspan6O70401 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.08■□□□□ 0.16
Tspan6O70401 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.08■□□□□ 0.16
Tspan6O70401 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.08■□□□□ 0.16
Tspan6O70401 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tspan6O70401 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tspan6O70401 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tspan6O70401 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tspan6O70401 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tspan6O70401 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Tspan6O70401 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Tspan6O70401 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tspan6O70401 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Tspan6O70401 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tspan6O70401 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tspan6O70401 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tspan6O70401 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tspan6O70401 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.07■□□□□ 0.16
Tspan6O70401 Gm43514-201ENSMUST00000198852 424 ntBASIC16.07■□□□□ 0.16
Tspan6O70401 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.07■□□□□ 0.16
Tspan6O70401 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Tspan6O70401 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.07■□□□□ 0.16
Tspan6O70401 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC16.07■□□□□ 0.16
Tspan6O70401 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
Tspan6O70401 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tspan6O70401 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tspan6O70401 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.07■□□□□ 0.16
Tspan6O70401 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms