Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.33■□□□□ 0.2
Pdlim1O70400 Gm11950-201ENSMUST00000121615 838 ntBASIC16.33■□□□□ 0.2
Pdlim1O70400 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.33■□□□□ 0.2
Pdlim1O70400 Gm29518-201ENSMUST00000190858 372 ntBASIC16.33■□□□□ 0.2
Pdlim1O70400 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pdlim1O70400 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Pdlim1O70400 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pdlim1O70400 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.33■□□□□ 0.2
Pdlim1O70400 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pdlim1O70400 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pdlim1O70400 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Pdlim1O70400 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pdlim1O70400 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pdlim1O70400 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pdlim1O70400 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pdlim1O70400 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
Pdlim1O70400 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Pdlim1O70400 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pdlim1O70400 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Pdlim1O70400 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pdlim1O70400 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pdlim1O70400 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pdlim1O70400 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Pdlim1O70400 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Pdlim1O70400 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Pdlim1O70400 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim1O70400 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim1O70400 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim1O70400 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim1O70400 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.32■□□□□ 0.2
Pdlim1O70400 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim1O70400 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim1O70400 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim1O70400 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim1O70400 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim1O70400 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim1O70400 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim1O70400 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim1O70400 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Pdlim1O70400 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Pdlim1O70400 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pdlim1O70400 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim1O70400 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim1O70400 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim1O70400 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim1O70400 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pdlim1O70400 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim1O70400 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim1O70400 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim1O70400 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.31■□□□□ 0.2
Pdlim1O70400 Gm45328-201ENSMUST00000210942 917 ntBASIC16.31■□□□□ 0.2
Pdlim1O70400 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim1O70400 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim1O70400 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim1O70400 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.31■□□□□ 0.2
Pdlim1O70400 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim1O70400 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pdlim1O70400 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pdlim1O70400 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim1O70400 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Pdlim1O70400 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim1O70400 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim1O70400 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim1O70400 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim1O70400 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim1O70400 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim1O70400 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim1O70400 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
Pdlim1O70400 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.3■□□□□ 0.2
Pdlim1O70400 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim1O70400 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim1O70400 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Pdlim1O70400 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim1O70400 Gm17808-201ENSMUST00000200859 894 ntBASIC16.3■□□□□ 0.2
Pdlim1O70400 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim1O70400 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim1O70400 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Pdlim1O70400 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim1O70400 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim1O70400 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim1O70400 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pdlim1O70400 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.3■□□□□ 0.2
Pdlim1O70400 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Pdlim1O70400 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim1O70400 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Pdlim1O70400 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim1O70400 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pdlim1O70400 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim1O70400 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.29■□□□□ 0.2
Pdlim1O70400 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim1O70400 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim1O70400 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim1O70400 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim1O70400 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim1O70400 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim1O70400 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim1O70400 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim1O70400 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pdlim1O70400 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pdlim1O70400 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms