Protein–RNA interactions for Protein: O70258

Sgce, Epsilon-sarcoglycan, mousemouse

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgceO70258 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgceO70258 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.8□□□□□ -0.04
SgceO70258 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.8□□□□□ -0.04
SgceO70258 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgceO70258 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgceO70258 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgceO70258 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SgceO70258 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgceO70258 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgceO70258 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SgceO70258 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgceO70258 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgceO70258 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SgceO70258 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgceO70258 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SgceO70258 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.8□□□□□ -0.04
SgceO70258 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SgceO70258 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SgceO70258 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SgceO70258 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgceO70258 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.79□□□□□ -0.04
SgceO70258 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC14.79□□□□□ -0.04
SgceO70258 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SgceO70258 Gm20472-201ENSMUST00000174403 1240 ntBASIC14.79□□□□□ -0.04
SgceO70258 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.79□□□□□ -0.04
SgceO70258 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgceO70258 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.79□□□□□ -0.04
SgceO70258 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SgceO70258 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.79□□□□□ -0.04
SgceO70258 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.79□□□□□ -0.04
SgceO70258 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgceO70258 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgceO70258 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgceO70258 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgceO70258 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.79□□□□□ -0.04
SgceO70258 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SgceO70258 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgceO70258 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SgceO70258 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgceO70258 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SgceO70258 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SgceO70258 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgceO70258 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgceO70258 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SgceO70258 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SgceO70258 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SgceO70258 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgceO70258 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgceO70258 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgceO70258 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgceO70258 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgceO70258 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgceO70258 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SgceO70258 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SgceO70258 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgceO70258 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgceO70258 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.78□□□□□ -0.04
SgceO70258 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgceO70258 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SgceO70258 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgceO70258 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SgceO70258 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgceO70258 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgceO70258 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgceO70258 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgceO70258 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SgceO70258 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SgceO70258 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SgceO70258 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SgceO70258 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SgceO70258 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SgceO70258 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SgceO70258 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
SgceO70258 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.77□□□□□ -0.04
SgceO70258 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SgceO70258 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SgceO70258 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SgceO70258 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
SgceO70258 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SgceO70258 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SgceO70258 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SgceO70258 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
SgceO70258 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SgceO70258 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.77□□□□□ -0.05
SgceO70258 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
SgceO70258 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
SgceO70258 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SgceO70258 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SgceO70258 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SgceO70258 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SgceO70258 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SgceO70258 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SgceO70258 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SgceO70258 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SgceO70258 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
SgceO70258 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.77□□□□□ -0.05
SgceO70258 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SgceO70258 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
SgceO70258 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.76□□□□□ -0.05
SgceO70258 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms