Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rdh5O55240 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rdh5O55240 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rdh5O55240 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rdh5O55240 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rdh5O55240 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rdh5O55240 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rdh5O55240 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rdh5O55240 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rdh5O55240 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rdh5O55240 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.67■□□□□ 0.1
Rdh5O55240 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Rdh5O55240 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rdh5O55240 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rdh5O55240 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Rdh5O55240 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rdh5O55240 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.67■□□□□ 0.1
Rdh5O55240 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rdh5O55240 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rdh5O55240 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh5O55240 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh5O55240 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rdh5O55240 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh5O55240 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh5O55240 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh5O55240 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Rdh5O55240 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh5O55240 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.66■□□□□ 0.1
Rdh5O55240 Gm45058-201ENSMUST00000205810 766 ntBASIC15.66■□□□□ 0.1
Rdh5O55240 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh5O55240 Gm10566-201ENSMUST00000086739 996 ntBASIC15.66■□□□□ 0.1
Rdh5O55240 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh5O55240 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh5O55240 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh5O55240 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rdh5O55240 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh5O55240 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh5O55240 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh5O55240 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh5O55240 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh5O55240 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh5O55240 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh5O55240 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh5O55240 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rdh5O55240 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Rdh5O55240 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh5O55240 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh5O55240 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
Rdh5O55240 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.65■□□□□ 0.1
Rdh5O55240 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh5O55240 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh5O55240 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh5O55240 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh5O55240 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh5O55240 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh5O55240 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Rdh5O55240 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh5O55240 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh5O55240 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh5O55240 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh5O55240 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
Rdh5O55240 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
Rdh5O55240 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh5O55240 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh5O55240 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh5O55240 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Rdh5O55240 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh5O55240 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Rdh5O55240 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh5O55240 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Rdh5O55240 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rdh5O55240 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
Rdh5O55240 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rdh5O55240 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rdh5O55240 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rdh5O55240 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rdh5O55240 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.64■□□□□ 0.09
Rdh5O55240 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rdh5O55240 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rdh5O55240 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Rdh5O55240 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Rdh5O55240 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.64■□□□□ 0.09
Rdh5O55240 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rdh5O55240 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.64■□□□□ 0.09
Rdh5O55240 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.64■□□□□ 0.09
Rdh5O55240 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rdh5O55240 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Rdh5O55240 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rdh5O55240 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rdh5O55240 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rdh5O55240 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rdh5O55240 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rdh5O55240 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rdh5O55240 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rdh5O55240 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rdh5O55240 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rdh5O55240 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rdh5O55240 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Rdh5O55240 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Rdh5O55240 Gm6659-201ENSMUST00000174752 547 ntBASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms