Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rpl35aO55142 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl35aO55142 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl35aO55142 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rpl35aO55142 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Rpl35aO55142 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rpl35aO55142 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl35aO55142 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl35aO55142 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl35aO55142 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl35aO55142 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl35aO55142 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl35aO55142 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl35aO55142 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Rpl35aO55142 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl35aO55142 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.34□□□□□ -0.43
Rpl35aO55142 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.34□□□□□ -0.43
Rpl35aO55142 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl35aO55142 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl35aO55142 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.34□□□□□ -0.43
Rpl35aO55142 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl35aO55142 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl35aO55142 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl35aO55142 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Rpl35aO55142 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl35aO55142 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rpl35aO55142 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Rpl35aO55142 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Rpl35aO55142 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.43
Rpl35aO55142 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
Rpl35aO55142 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rpl35aO55142 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Rpl35aO55142 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rpl35aO55142 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl35aO55142 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl35aO55142 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl35aO55142 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Rpl35aO55142 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Rpl35aO55142 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl35aO55142 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl35aO55142 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.33□□□□□ -0.44
Rpl35aO55142 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.33□□□□□ -0.44
Rpl35aO55142 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl35aO55142 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl35aO55142 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl35aO55142 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC12.33□□□□□ -0.44
Rpl35aO55142 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl35aO55142 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Rpl35aO55142 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rpl35aO55142 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl35aO55142 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rpl35aO55142 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl35aO55142 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl35aO55142 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl35aO55142 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl35aO55142 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl35aO55142 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl35aO55142 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC12.33□□□□□ -0.44
Rpl35aO55142 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rpl35aO55142 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl35aO55142 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl35aO55142 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl35aO55142 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl35aO55142 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl35aO55142 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl35aO55142 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl35aO55142 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl35aO55142 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl35aO55142 Gm11355-201ENSMUST00000121120 306 ntBASIC12.32□□□□□ -0.44
Rpl35aO55142 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl35aO55142 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl35aO55142 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl35aO55142 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Rpl35aO55142 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.32□□□□□ -0.44
Rpl35aO55142 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl35aO55142 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl35aO55142 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl35aO55142 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl35aO55142 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl35aO55142 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl35aO55142 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl35aO55142 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl35aO55142 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.32□□□□□ -0.44
Rpl35aO55142 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl35aO55142 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl35aO55142 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rpl35aO55142 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl35aO55142 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl35aO55142 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC12.32□□□□□ -0.44
Rpl35aO55142 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl35aO55142 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rpl35aO55142 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl35aO55142 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rpl35aO55142 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rpl35aO55142 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Rpl35aO55142 Actl10-202ENSMUST00000226583 1501 ntBASIC12.32□□□□□ -0.44
Rpl35aO55142 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl35aO55142 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl35aO55142 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rpl35aO55142 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms