Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
SncaO55042 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SncaO55042 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SncaO55042 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SncaO55042 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SncaO55042 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SncaO55042 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SncaO55042 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SncaO55042 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SncaO55042 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SncaO55042 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SncaO55042 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SncaO55042 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
SncaO55042 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SncaO55042 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SncaO55042 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SncaO55042 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SncaO55042 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SncaO55042 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SncaO55042 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SncaO55042 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.71□□□□□ -0.21
SncaO55042 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SncaO55042 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SncaO55042 Gm37856-201ENSMUST00000191634 999 ntBASIC13.71□□□□□ -0.21
SncaO55042 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
SncaO55042 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.71□□□□□ -0.22
SncaO55042 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SncaO55042 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
SncaO55042 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.71□□□□□ -0.22
SncaO55042 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SncaO55042 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
SncaO55042 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SncaO55042 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
SncaO55042 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
SncaO55042 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SncaO55042 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SncaO55042 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SncaO55042 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.7□□□□□ -0.22
SncaO55042 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SncaO55042 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SncaO55042 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SncaO55042 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.7□□□□□ -0.22
SncaO55042 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SncaO55042 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SncaO55042 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
SncaO55042 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SncaO55042 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SncaO55042 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SncaO55042 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SncaO55042 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SncaO55042 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SncaO55042 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
SncaO55042 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SncaO55042 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SncaO55042 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
SncaO55042 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SncaO55042 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SncaO55042 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SncaO55042 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SncaO55042 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SncaO55042 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SncaO55042 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SncaO55042 Gm15039-201ENSMUST00000118914 875 ntBASIC13.69□□□□□ -0.22
SncaO55042 Gm44878-201ENSMUST00000205812 1295 ntBASIC13.69□□□□□ -0.22
SncaO55042 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SncaO55042 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SncaO55042 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.69□□□□□ -0.22
SncaO55042 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SncaO55042 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SncaO55042 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SncaO55042 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
SncaO55042 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SncaO55042 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SncaO55042 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SncaO55042 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SncaO55042 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SncaO55042 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SncaO55042 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SncaO55042 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SncaO55042 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SncaO55042 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
SncaO55042 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SncaO55042 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SncaO55042 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SncaO55042 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SncaO55042 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SncaO55042 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SncaO55042 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SncaO55042 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SncaO55042 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SncaO55042 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SncaO55042 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.68□□□□□ -0.22
SncaO55042 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.68□□□□□ -0.22
SncaO55042 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SncaO55042 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SncaO55042 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
SncaO55042 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SncaO55042 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SncaO55042 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SncaO55042 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms