Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Copb2O55029 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.98■□□□□ 0.63
Copb2O55029 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Copb2O55029 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Copb2O55029 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Copb2O55029 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Copb2O55029 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Copb2O55029 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Copb2O55029 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.97■□□□□ 0.63
Copb2O55029 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Copb2O55029 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.97■□□□□ 0.63
Copb2O55029 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Copb2O55029 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Copb2O55029 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Copb2O55029 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Copb2O55029 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.97■□□□□ 0.63
Copb2O55029 Gm10052-201ENSMUST00000168019 960 ntBASIC18.97■□□□□ 0.63
Copb2O55029 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.97■□□□□ 0.63
Copb2O55029 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Copb2O55029 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.97■□□□□ 0.63
Copb2O55029 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Copb2O55029 Gm7729-201ENSMUST00000050143 801 ntBASIC18.97■□□□□ 0.63
Copb2O55029 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Copb2O55029 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Copb2O55029 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Copb2O55029 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Copb2O55029 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Copb2O55029 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Copb2O55029 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Copb2O55029 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Copb2O55029 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Copb2O55029 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Copb2O55029 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Copb2O55029 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Copb2O55029 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.96■□□□□ 0.63
Copb2O55029 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.96■□□□□ 0.63
Copb2O55029 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.96■□□□□ 0.63
Copb2O55029 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
Copb2O55029 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
Copb2O55029 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
Copb2O55029 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.96■□□□□ 0.63
Copb2O55029 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Copb2O55029 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.96■□□□□ 0.63
Copb2O55029 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Copb2O55029 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.96■□□□□ 0.63
Copb2O55029 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Copb2O55029 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Copb2O55029 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Copb2O55029 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Copb2O55029 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Copb2O55029 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Copb2O55029 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Copb2O55029 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Copb2O55029 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Copb2O55029 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.95■□□□□ 0.62
Copb2O55029 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Copb2O55029 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Copb2O55029 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Copb2O55029 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Copb2O55029 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.95■□□□□ 0.62
Copb2O55029 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.95■□□□□ 0.62
Copb2O55029 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Copb2O55029 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
Copb2O55029 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Copb2O55029 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Copb2O55029 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Copb2O55029 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Copb2O55029 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Copb2O55029 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Copb2O55029 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Copb2O55029 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Copb2O55029 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Copb2O55029 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Copb2O55029 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Copb2O55029 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Copb2O55029 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.94■□□□□ 0.62
Copb2O55029 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Copb2O55029 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.94■□□□□ 0.62
Copb2O55029 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Copb2O55029 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.94■□□□□ 0.62
Copb2O55029 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC18.94■□□□□ 0.62
Copb2O55029 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Copb2O55029 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Copb2O55029 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.94■□□□□ 0.62
Copb2O55029 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Copb2O55029 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Copb2O55029 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Copb2O55029 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Copb2O55029 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Copb2O55029 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Copb2O55029 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Copb2O55029 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Copb2O55029 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Copb2O55029 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Copb2O55029 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Copb2O55029 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Copb2O55029 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Copb2O55029 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Copb2O55029 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Copb2O55029 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms