Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Prom1O54990 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Prom1O54990 Gm13418-201ENSMUST00000119097 944 ntBASIC18.2■□□□□ 0.5
Prom1O54990 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.2■□□□□ 0.5
Prom1O54990 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Prom1O54990 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Prom1O54990 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prom1O54990 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Prom1O54990 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Prom1O54990 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prom1O54990 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Prom1O54990 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prom1O54990 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Prom1O54990 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prom1O54990 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prom1O54990 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Prom1O54990 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Prom1O54990 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prom1O54990 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prom1O54990 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prom1O54990 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prom1O54990 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prom1O54990 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prom1O54990 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Prom1O54990 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prom1O54990 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.19■□□□□ 0.5
Prom1O54990 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prom1O54990 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prom1O54990 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prom1O54990 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prom1O54990 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prom1O54990 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Prom1O54990 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prom1O54990 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prom1O54990 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prom1O54990 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Prom1O54990 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Prom1O54990 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Prom1O54990 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Prom1O54990 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Prom1O54990 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.19■□□□□ 0.5
Prom1O54990 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prom1O54990 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Prom1O54990 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Prom1O54990 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Prom1O54990 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.18■□□□□ 0.5
Prom1O54990 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prom1O54990 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prom1O54990 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prom1O54990 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prom1O54990 Gm11594-201ENSMUST00000122313 162 ntBASIC18.18■□□□□ 0.5
Prom1O54990 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prom1O54990 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prom1O54990 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Prom1O54990 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Prom1O54990 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prom1O54990 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prom1O54990 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.18■□□□□ 0.5
Prom1O54990 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prom1O54990 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Prom1O54990 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prom1O54990 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Prom1O54990 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Prom1O54990 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Prom1O54990 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.17■□□□□ 0.5
Prom1O54990 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prom1O54990 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Prom1O54990 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.17■□□□□ 0.5
Prom1O54990 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prom1O54990 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Prom1O54990 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prom1O54990 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prom1O54990 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.17■□□□□ 0.5
Prom1O54990 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Prom1O54990 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Prom1O54990 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
Prom1O54990 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prom1O54990 Gm25925-201ENSMUST00000158314 306 ntBASIC18.17■□□□□ 0.5
Prom1O54990 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC18.17■□□□□ 0.5
Prom1O54990 Gm5364-201ENSMUST00000216789 889 ntBASIC18.17■□□□□ 0.5
Prom1O54990 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.17■□□□□ 0.5
Prom1O54990 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prom1O54990 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prom1O54990 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Prom1O54990 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Prom1O54990 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prom1O54990 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prom1O54990 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Prom1O54990 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.16■□□□□ 0.5
Prom1O54990 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.16■□□□□ 0.5
Prom1O54990 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.16■□□□□ 0.5
Prom1O54990 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prom1O54990 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prom1O54990 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prom1O54990 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prom1O54990 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prom1O54990 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prom1O54990 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Prom1O54990 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Prom1O54990 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms