Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Per2O54943 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Per2O54943 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Per2O54943 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Per2O54943 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Per2O54943 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Per2O54943 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Per2O54943 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Per2O54943 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Per2O54943 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Per2O54943 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Per2O54943 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Per2O54943 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.24■□□□□ 0.35
Per2O54943 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Per2O54943 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Per2O54943 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.24■□□□□ 0.35
Per2O54943 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Per2O54943 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Per2O54943 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Per2O54943 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.24■□□□□ 0.35
Per2O54943 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Per2O54943 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Per2O54943 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.24■□□□□ 0.35
Per2O54943 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Per2O54943 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Per2O54943 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Per2O54943 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Per2O54943 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Per2O54943 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
Per2O54943 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Per2O54943 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Per2O54943 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Per2O54943 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Per2O54943 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Per2O54943 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.24■□□□□ 0.35
Per2O54943 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Per2O54943 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.23■□□□□ 0.35
Per2O54943 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Per2O54943 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Per2O54943 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Per2O54943 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.23■□□□□ 0.35
Per2O54943 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Per2O54943 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Per2O54943 Phf7-203ENSMUST00000226565 1971 ntBASIC17.23■□□□□ 0.35
Per2O54943 Gm13559-201ENSMUST00000120476 863 ntBASIC17.23■□□□□ 0.35
Per2O54943 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.23■□□□□ 0.35
Per2O54943 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Per2O54943 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Per2O54943 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Per2O54943 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Per2O54943 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Per2O54943 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.23■□□□□ 0.35
Per2O54943 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Per2O54943 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Per2O54943 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Per2O54943 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Per2O54943 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Per2O54943 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Per2O54943 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Per2O54943 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Per2O54943 Actl10-202ENSMUST00000226583 1501 ntBASIC17.22■□□□□ 0.35
Per2O54943 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Per2O54943 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Per2O54943 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Per2O54943 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Per2O54943 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.22■□□□□ 0.35
Per2O54943 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.22■□□□□ 0.35
Per2O54943 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.22■□□□□ 0.35
Per2O54943 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.22■□□□□ 0.35
Per2O54943 Gm18115-201ENSMUST00000221209 621 ntBASIC17.22■□□□□ 0.35
Per2O54943 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Per2O54943 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Per2O54943 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Per2O54943 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Per2O54943 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Per2O54943 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Per2O54943 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Per2O54943 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Per2O54943 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Per2O54943 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Per2O54943 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Per2O54943 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Per2O54943 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Per2O54943 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Per2O54943 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Per2O54943 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Per2O54943 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Per2O54943 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Per2O54943 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Per2O54943 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.21■□□□□ 0.35
Per2O54943 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.21■□□□□ 0.35
Per2O54943 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.21■□□□□ 0.35
Per2O54943 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.21■□□□□ 0.35
Per2O54943 Gm7213-201ENSMUST00000215977 950 ntBASIC17.21■□□□□ 0.35
Per2O54943 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Per2O54943 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Per2O54943 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Per2O54943 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Per2O54943 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Per2O54943 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms