Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarce1O54941 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarce1O54941 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.67■□□□□ 0.74
Smarce1O54941 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.67■□□□□ 0.74
Smarce1O54941 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Smarce1O54941 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.67■□□□□ 0.74
Smarce1O54941 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.67■□□□□ 0.74
Smarce1O54941 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.67■□□□□ 0.74
Smarce1O54941 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarce1O54941 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Smarce1O54941 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smarce1O54941 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smarce1O54941 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarce1O54941 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarce1O54941 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.67■□□□□ 0.74
Smarce1O54941 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarce1O54941 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Smarce1O54941 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarce1O54941 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarce1O54941 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Smarce1O54941 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smarce1O54941 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smarce1O54941 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarce1O54941 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarce1O54941 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smarce1O54941 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smarce1O54941 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarce1O54941 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.66■□□□□ 0.74
Smarce1O54941 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarce1O54941 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarce1O54941 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC19.66■□□□□ 0.74
Smarce1O54941 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Smarce1O54941 Odf3b-204ENSMUST00000227834 930 ntBASIC19.66■□□□□ 0.74
Smarce1O54941 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarce1O54941 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarce1O54941 Dancr-204ENSMUST00000132389 2347 ntBASIC19.66■□□□□ 0.74
Smarce1O54941 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarce1O54941 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarce1O54941 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Smarce1O54941 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarce1O54941 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarce1O54941 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarce1O54941 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarce1O54941 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarce1O54941 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarce1O54941 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smarce1O54941 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smarce1O54941 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarce1O54941 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarce1O54941 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Smarce1O54941 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Smarce1O54941 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarce1O54941 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarce1O54941 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarce1O54941 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarce1O54941 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarce1O54941 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarce1O54941 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.65■□□□□ 0.74
Smarce1O54941 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarce1O54941 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarce1O54941 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Smarce1O54941 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC19.65■□□□□ 0.74
Smarce1O54941 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarce1O54941 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.65■□□□□ 0.74
Smarce1O54941 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarce1O54941 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarce1O54941 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarce1O54941 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smarce1O54941 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.74
Smarce1O54941 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smarce1O54941 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smarce1O54941 Gm10653-202ENSMUST00000139570 835 ntBASIC19.64■□□□□ 0.73
Smarce1O54941 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarce1O54941 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smarce1O54941 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.64■□□□□ 0.73
Smarce1O54941 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarce1O54941 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarce1O54941 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarce1O54941 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarce1O54941 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarce1O54941 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Smarce1O54941 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarce1O54941 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Smarce1O54941 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Smarce1O54941 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarce1O54941 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smarce1O54941 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC19.63■□□□□ 0.73
Smarce1O54941 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Smarce1O54941 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.63■□□□□ 0.73
Smarce1O54941 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarce1O54941 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarce1O54941 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Smarce1O54941 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarce1O54941 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Smarce1O54941 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smarce1O54941 Gm13168-201ENSMUST00000121771 632 ntBASIC19.63■□□□□ 0.73
Smarce1O54941 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.63■□□□□ 0.73
Smarce1O54941 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.63■□□□□ 0.73
Smarce1O54941 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Smarce1O54941 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms