Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Dkk1O54908 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Dkk1O54908 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Dkk1O54908 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.57□□□□□ -0.08
Dkk1O54908 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Dkk1O54908 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Dkk1O54908 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Dkk1O54908 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Dkk1O54908 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Dkk1O54908 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.56□□□□□ -0.08
Dkk1O54908 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Dkk1O54908 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Dkk1O54908 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Dkk1O54908 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Dkk1O54908 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Dkk1O54908 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Dkk1O54908 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC14.56□□□□□ -0.08
Dkk1O54908 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Dkk1O54908 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.56□□□□□ -0.08
Dkk1O54908 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
Dkk1O54908 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Dkk1O54908 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC14.56□□□□□ -0.08
Dkk1O54908 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Dkk1O54908 Gm37024-201ENSMUST00000192224 868 ntBASIC14.56□□□□□ -0.08
Dkk1O54908 Gm37638-201ENSMUST00000194337 1123 ntBASIC14.56□□□□□ -0.08
Dkk1O54908 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC14.56□□□□□ -0.08
Dkk1O54908 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.56□□□□□ -0.08
Dkk1O54908 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.56□□□□□ -0.08
Dkk1O54908 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Dkk1O54908 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.56□□□□□ -0.08
Dkk1O54908 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Dkk1O54908 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Dkk1O54908 Gm37891-201ENSMUST00000195585 1326 ntBASIC14.56□□□□□ -0.08
Dkk1O54908 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.56□□□□□ -0.08
Dkk1O54908 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Dkk1O54908 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Dkk1O54908 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Dkk1O54908 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Dkk1O54908 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Dkk1O54908 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Dkk1O54908 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Dkk1O54908 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Dkk1O54908 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Dkk1O54908 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Dkk1O54908 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Dkk1O54908 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Dkk1O54908 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Dkk1O54908 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Dkk1O54908 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC14.55□□□□□ -0.08
Dkk1O54908 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Dkk1O54908 Ctcflos-203ENSMUST00000144256 1237 ntTSL 5 BASIC14.55□□□□□ -0.08
Dkk1O54908 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Dkk1O54908 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC14.55□□□□□ -0.08
Dkk1O54908 Gm44038-201ENSMUST00000203952 889 ntBASIC14.55□□□□□ -0.08
Dkk1O54908 Gm45058-201ENSMUST00000205810 766 ntBASIC14.55□□□□□ -0.08
Dkk1O54908 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Dkk1O54908 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Dkk1O54908 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Dkk1O54908 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Dkk1O54908 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Dkk1O54908 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Dkk1O54908 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Dkk1O54908 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Dkk1O54908 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Dkk1O54908 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Dkk1O54908 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Dkk1O54908 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Dkk1O54908 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.55□□□□□ -0.08
Dkk1O54908 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.54□□□□□ -0.08
Dkk1O54908 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Dkk1O54908 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Dkk1O54908 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Dkk1O54908 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Dkk1O54908 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Dkk1O54908 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Dkk1O54908 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Dkk1O54908 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Dkk1O54908 Ifna13-201ENSMUST00000105149 819 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Dkk1O54908 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Dkk1O54908 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Dkk1O54908 Gm13474-201ENSMUST00000122466 815 ntBASIC14.54□□□□□ -0.08
Dkk1O54908 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.54□□□□□ -0.08
Dkk1O54908 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC14.54□□□□□ -0.08
Dkk1O54908 Gm22693-201ENSMUST00000175049 442 ntBASIC14.54□□□□□ -0.08
Dkk1O54908 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Dkk1O54908 Gm5708-201ENSMUST00000196289 886 ntBASIC14.54□□□□□ -0.08
Dkk1O54908 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Dkk1O54908 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Dkk1O54908 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Dkk1O54908 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Dkk1O54908 Gm10617-201ENSMUST00000098368 1172 ntBASIC14.54□□□□□ -0.08
Dkk1O54908 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Dkk1O54908 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Dkk1O54908 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Dkk1O54908 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Dkk1O54908 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Dkk1O54908 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Dkk1O54908 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.54□□□□□ -0.08
Dkk1O54908 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.54□□□□□ -0.08
Dkk1O54908 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms