Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.71■□□□□ 0.27
ChkaO54804 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.71■□□□□ 0.27
ChkaO54804 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ChkaO54804 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.71■□□□□ 0.27
ChkaO54804 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ChkaO54804 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ChkaO54804 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
ChkaO54804 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ChkaO54804 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ChkaO54804 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
ChkaO54804 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
ChkaO54804 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ChkaO54804 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ChkaO54804 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ChkaO54804 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ChkaO54804 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ChkaO54804 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.71■□□□□ 0.26
ChkaO54804 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
ChkaO54804 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
ChkaO54804 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
ChkaO54804 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ChkaO54804 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ChkaO54804 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ChkaO54804 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ChkaO54804 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ChkaO54804 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
ChkaO54804 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
ChkaO54804 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ChkaO54804 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.7■□□□□ 0.26
ChkaO54804 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.7■□□□□ 0.26
ChkaO54804 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ChkaO54804 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.7■□□□□ 0.26
ChkaO54804 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ChkaO54804 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
ChkaO54804 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ChkaO54804 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ChkaO54804 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ChkaO54804 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ChkaO54804 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
ChkaO54804 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ChkaO54804 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ChkaO54804 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.7■□□□□ 0.26
ChkaO54804 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ChkaO54804 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ChkaO54804 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ChkaO54804 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ChkaO54804 Phf7-203ENSMUST00000226565 1971 ntBASIC16.69■□□□□ 0.26
ChkaO54804 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ChkaO54804 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ChkaO54804 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ChkaO54804 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
ChkaO54804 Gm13186-201ENSMUST00000118031 316 ntBASIC16.69■□□□□ 0.26
ChkaO54804 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ChkaO54804 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
ChkaO54804 Gm27463-201ENSMUST00000183569 57 ntBASIC16.69■□□□□ 0.26
ChkaO54804 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.69■□□□□ 0.26
ChkaO54804 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.69■□□□□ 0.26
ChkaO54804 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ChkaO54804 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ChkaO54804 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ChkaO54804 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ChkaO54804 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ChkaO54804 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ChkaO54804 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ChkaO54804 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ChkaO54804 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
ChkaO54804 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ChkaO54804 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ChkaO54804 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ChkaO54804 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ChkaO54804 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ChkaO54804 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ChkaO54804 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ChkaO54804 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ChkaO54804 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ChkaO54804 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ChkaO54804 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
ChkaO54804 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
ChkaO54804 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.68■□□□□ 0.26
ChkaO54804 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ChkaO54804 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ChkaO54804 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ChkaO54804 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ChkaO54804 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ChkaO54804 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ChkaO54804 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.68■□□□□ 0.26
ChkaO54804 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
ChkaO54804 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ChkaO54804 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ChkaO54804 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ChkaO54804 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
ChkaO54804 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ChkaO54804 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
ChkaO54804 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ChkaO54804 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ChkaO54804 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ChkaO54804 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
ChkaO54804 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ChkaO54804 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
ChkaO54804 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms