Protein–RNA interactions for Protein: O35980

Nthl1, Endonuclease III-like protein 1, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nthl1O35980 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.4■□□□□ 0.22
Nthl1O35980 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Nthl1O35980 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nthl1O35980 Gm15372-201ENSMUST00000120729 834 ntBASIC16.4■□□□□ 0.22
Nthl1O35980 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nthl1O35980 Gm5864-201ENSMUST00000202263 970 ntBASIC16.4■□□□□ 0.22
Nthl1O35980 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.4■□□□□ 0.22
Nthl1O35980 Mzt1-203ENSMUST00000227948 952 ntBASIC16.4■□□□□ 0.22
Nthl1O35980 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nthl1O35980 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Nthl1O35980 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nthl1O35980 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nthl1O35980 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nthl1O35980 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nthl1O35980 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nthl1O35980 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Nthl1O35980 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.39■□□□□ 0.22
Nthl1O35980 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Nthl1O35980 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Nthl1O35980 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nthl1O35980 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nthl1O35980 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nthl1O35980 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nthl1O35980 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Nthl1O35980 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Nthl1O35980 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.39■□□□□ 0.21
Nthl1O35980 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nthl1O35980 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Nthl1O35980 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nthl1O35980 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nthl1O35980 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nthl1O35980 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Nthl1O35980 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nthl1O35980 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Nthl1O35980 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Nthl1O35980 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Nthl1O35980 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nthl1O35980 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nthl1O35980 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nthl1O35980 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nthl1O35980 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nthl1O35980 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nthl1O35980 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nthl1O35980 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.38■□□□□ 0.21
Nthl1O35980 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nthl1O35980 Gm28659-201ENSMUST00000188013 759 ntBASIC16.38■□□□□ 0.21
Nthl1O35980 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.38■□□□□ 0.21
Nthl1O35980 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.38■□□□□ 0.21
Nthl1O35980 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nthl1O35980 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Nthl1O35980 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.38■□□□□ 0.21
Nthl1O35980 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nthl1O35980 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nthl1O35980 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Nthl1O35980 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nthl1O35980 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Nthl1O35980 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nthl1O35980 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nthl1O35980 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nthl1O35980 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.37■□□□□ 0.21
Nthl1O35980 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Nthl1O35980 Gm13884-201ENSMUST00000118103 829 ntBASIC16.37■□□□□ 0.21
Nthl1O35980 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nthl1O35980 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.37■□□□□ 0.21
Nthl1O35980 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nthl1O35980 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nthl1O35980 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Nthl1O35980 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nthl1O35980 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.37■□□□□ 0.21
Nthl1O35980 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nthl1O35980 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nthl1O35980 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nthl1O35980 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nthl1O35980 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nthl1O35980 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Nthl1O35980 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Nthl1O35980 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nthl1O35980 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nthl1O35980 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nthl1O35980 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nthl1O35980 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nthl1O35980 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nthl1O35980 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Nthl1O35980 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nthl1O35980 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.36■□□□□ 0.21
Nthl1O35980 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Nthl1O35980 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Nthl1O35980 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Nthl1O35980 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.36■□□□□ 0.21
Nthl1O35980 Gm12644-201ENSMUST00000119935 606 ntBASIC16.36■□□□□ 0.21
Nthl1O35980 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nthl1O35980 Rprl3-201ENSMUST00000157400 290 ntBASIC16.36■□□□□ 0.21
Nthl1O35980 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Nthl1O35980 Mir8098-201ENSMUST00000184011 137 ntBASIC16.36■□□□□ 0.21
Nthl1O35980 Gm44771-201ENSMUST00000206975 626 ntBASIC16.36■□□□□ 0.21
Nthl1O35980 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Nthl1O35980 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nthl1O35980 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nthl1O35980 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Nthl1O35980 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms