Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Matn3O35701 Gm12441-201ENSMUST00000121806 588 ntBASIC15.07■□□□□ 0
Matn3O35701 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Matn3O35701 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.07■□□□□ 0
Matn3O35701 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Matn3O35701 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Matn3O35701 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.07■□□□□ 0
Matn3O35701 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Matn3O35701 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Matn3O35701 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Matn3O35701 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.07■□□□□ 0
Matn3O35701 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Matn3O35701 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.07■□□□□ 0
Matn3O35701 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Matn3O35701 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Matn3O35701 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Matn3O35701 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Matn3O35701 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.07■□□□□ 0
Matn3O35701 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Matn3O35701 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Matn3O35701 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Matn3O35701 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.06■□□□□ 0
Matn3O35701 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.06■□□□□ 0
Matn3O35701 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Matn3O35701 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.06■□□□□ 0
Matn3O35701 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Matn3O35701 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Matn3O35701 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Matn3O35701 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Matn3O35701 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Matn3O35701 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC15.06■□□□□ 0
Matn3O35701 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.06■□□□□ 0
Matn3O35701 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Matn3O35701 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.06■□□□□ 0
Matn3O35701 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Matn3O35701 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.06■□□□□ 0
Matn3O35701 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Matn3O35701 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Matn3O35701 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Matn3O35701 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.06■□□□□ 0
Matn3O35701 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Matn3O35701 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Matn3O35701 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.06■□□□□ 0
Matn3O35701 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Matn3O35701 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Matn3O35701 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Matn3O35701 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Matn3O35701 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Matn3O35701 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Matn3O35701 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Matn3O35701 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.05■□□□□ 0
Matn3O35701 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.05■□□□□ 0
Matn3O35701 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Matn3O35701 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.05■□□□□ 0
Matn3O35701 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.05■□□□□ 0
Matn3O35701 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.05■□□□□ 0
Matn3O35701 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Matn3O35701 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Matn3O35701 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Matn3O35701 Gm2399-201ENSMUST00000104944 225 ntBASIC15.05■□□□□ -0
Matn3O35701 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Matn3O35701 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.05■□□□□ -0
Matn3O35701 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.05■□□□□ -0
Matn3O35701 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.05■□□□□ -0
Matn3O35701 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Matn3O35701 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Matn3O35701 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Matn3O35701 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.05■□□□□ -0
Matn3O35701 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Matn3O35701 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Matn3O35701 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Matn3O35701 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Matn3O35701 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.05■□□□□ -0
Matn3O35701 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Matn3O35701 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Matn3O35701 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Matn3O35701 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Matn3O35701 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.05■□□□□ -0
Matn3O35701 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Matn3O35701 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Matn3O35701 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Matn3O35701 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.04■□□□□ -0
Matn3O35701 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Matn3O35701 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Matn3O35701 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Matn3O35701 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.04■□□□□ -0
Matn3O35701 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Matn3O35701 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.04■□□□□ -0
Matn3O35701 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Matn3O35701 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Matn3O35701 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Matn3O35701 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Matn3O35701 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Matn3O35701 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.04■□□□□ -0
Matn3O35701 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC15.04■□□□□ -0
Matn3O35701 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC15.04■□□□□ -0
Matn3O35701 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Matn3O35701 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Matn3O35701 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.04■□□□□ -0
Matn3O35701 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms