Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Abca4O35600 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Abca4O35600 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC15.49■□□□□ 0.07
Abca4O35600 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Abca4O35600 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Abca4O35600 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC15.49■□□□□ 0.07
Abca4O35600 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Abca4O35600 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Abca4O35600 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Abca4O35600 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Abca4O35600 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.49■□□□□ 0.07
Abca4O35600 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Abca4O35600 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Abca4O35600 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Abca4O35600 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Abca4O35600 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Abca4O35600 Gm38160-201ENSMUST00000193090 2499 ntBASIC15.48■□□□□ 0.07
Abca4O35600 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Abca4O35600 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Abca4O35600 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Abca4O35600 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Abca4O35600 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.48■□□□□ 0.07
Abca4O35600 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.48■□□□□ 0.07
Abca4O35600 Mir8112-201ENSMUST00000184382 131 ntBASIC15.48■□□□□ 0.07
Abca4O35600 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.48■□□□□ 0.07
Abca4O35600 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Abca4O35600 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Abca4O35600 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Abca4O35600 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.48■□□□□ 0.07
Abca4O35600 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Abca4O35600 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Abca4O35600 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Abca4O35600 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Abca4O35600 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Abca4O35600 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC15.47■□□□□ 0.07
Abca4O35600 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Abca4O35600 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Abca4O35600 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Abca4O35600 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Abca4O35600 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Abca4O35600 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Abca4O35600 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Abca4O35600 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC15.47■□□□□ 0.07
Abca4O35600 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Abca4O35600 Gm7730-201ENSMUST00000212486 454 ntBASIC15.47■□□□□ 0.07
Abca4O35600 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.47■□□□□ 0.07
Abca4O35600 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Abca4O35600 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Abca4O35600 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Abca4O35600 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Abca4O35600 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.46■□□□□ 0.07
Abca4O35600 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Abca4O35600 Gm13597-201ENSMUST00000121239 375 ntBASIC15.46■□□□□ 0.07
Abca4O35600 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Abca4O35600 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.46■□□□□ 0.07
Abca4O35600 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Abca4O35600 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.46■□□□□ 0.07
Abca4O35600 Gm43125-201ENSMUST00000201724 730 ntBASIC15.46■□□□□ 0.07
Abca4O35600 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Abca4O35600 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Abca4O35600 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Abca4O35600 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Abca4O35600 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Abca4O35600 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Abca4O35600 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Abca4O35600 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Abca4O35600 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Abca4O35600 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC15.46■□□□□ 0.07
Abca4O35600 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Abca4O35600 Gm15427-201ENSMUST00000117288 531 ntBASIC15.46■□□□□ 0.07
Abca4O35600 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC15.46■□□□□ 0.07
Abca4O35600 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Abca4O35600 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Abca4O35600 Gm9794-201ENSMUST00000202370 423 ntBASIC15.46■□□□□ 0.07
Abca4O35600 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.46■□□□□ 0.07
Abca4O35600 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Abca4O35600 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Abca4O35600 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Abca4O35600 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Abca4O35600 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Abca4O35600 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Abca4O35600 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Abca4O35600 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Abca4O35600 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abca4O35600 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.45■□□□□ 0.06
Abca4O35600 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Abca4O35600 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abca4O35600 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Abca4O35600 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.45■□□□□ 0.06
Abca4O35600 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abca4O35600 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abca4O35600 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abca4O35600 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abca4O35600 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abca4O35600 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abca4O35600 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abca4O35600 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abca4O35600 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abca4O35600 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Abca4O35600 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms