Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Efnb3O35393 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Efnb3O35393 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.12□□□□□ -0.31
Efnb3O35393 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Efnb3O35393 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Efnb3O35393 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Efnb3O35393 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Efnb3O35393 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Efnb3O35393 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Efnb3O35393 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Efnb3O35393 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Efnb3O35393 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Efnb3O35393 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Efnb3O35393 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Efnb3O35393 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Efnb3O35393 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Efnb3O35393 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.11□□□□□ -0.31
Efnb3O35393 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Efnb3O35393 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Efnb3O35393 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Efnb3O35393 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Efnb3O35393 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.11□□□□□ -0.31
Efnb3O35393 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Efnb3O35393 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Efnb3O35393 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.11□□□□□ -0.31
Efnb3O35393 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Efnb3O35393 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Efnb3O35393 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Efnb3O35393 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Efnb3O35393 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Efnb3O35393 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Efnb3O35393 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Efnb3O35393 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Efnb3O35393 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.1□□□□□ -0.31
Efnb3O35393 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Efnb3O35393 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Efnb3O35393 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.1□□□□□ -0.31
Efnb3O35393 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Efnb3O35393 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Efnb3O35393 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Efnb3O35393 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Efnb3O35393 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Efnb3O35393 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Efnb3O35393 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Efnb3O35393 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Efnb3O35393 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.1□□□□□ -0.31
Efnb3O35393 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Efnb3O35393 Alkbh1-212ENSMUST00000185301 408 ntBASIC13.1□□□□□ -0.31
Efnb3O35393 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.1□□□□□ -0.31
Efnb3O35393 Gm4974-201ENSMUST00000209974 875 ntBASIC13.1□□□□□ -0.31
Efnb3O35393 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Efnb3O35393 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Efnb3O35393 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.1□□□□□ -0.31
Efnb3O35393 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Efnb3O35393 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Efnb3O35393 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Efnb3O35393 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Efnb3O35393 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Efnb3O35393 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Efnb3O35393 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Efnb3O35393 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.1□□□□□ -0.31
Efnb3O35393 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Efnb3O35393 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Efnb3O35393 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.1□□□□□ -0.31
Efnb3O35393 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Efnb3O35393 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.1□□□□□ -0.31
Efnb3O35393 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Efnb3O35393 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Efnb3O35393 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Efnb3O35393 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.09□□□□□ -0.31
Efnb3O35393 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Efnb3O35393 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.09□□□□□ -0.31
Efnb3O35393 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Efnb3O35393 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Efnb3O35393 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.09□□□□□ -0.31
Efnb3O35393 Gm12527-201ENSMUST00000117967 564 ntBASIC13.09□□□□□ -0.31
Efnb3O35393 Gm12896-201ENSMUST00000118430 226 ntBASIC13.09□□□□□ -0.31
Efnb3O35393 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Efnb3O35393 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Efnb3O35393 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Efnb3O35393 Gm20760-201ENSMUST00000179197 648 ntBASIC13.09□□□□□ -0.31
Efnb3O35393 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.09□□□□□ -0.31
Efnb3O35393 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Efnb3O35393 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC13.09□□□□□ -0.31
Efnb3O35393 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Efnb3O35393 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Efnb3O35393 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Efnb3O35393 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Efnb3O35393 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Efnb3O35393 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Efnb3O35393 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Efnb3O35393 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Efnb3O35393 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Efnb3O35393 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.09□□□□□ -0.31
Efnb3O35393 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Efnb3O35393 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Efnb3O35393 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Efnb3O35393 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.08□□□□□ -0.31
Efnb3O35393 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Efnb3O35393 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms