Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Tnfsf11O35235 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.96□□□□□ -0.34
Tnfsf11O35235 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfsf11O35235 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Tnfsf11O35235 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf11O35235 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf11O35235 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf11O35235 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf11O35235 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf11O35235 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf11O35235 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf11O35235 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf11O35235 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf11O35235 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf11O35235 Gm6211-202ENSMUST00000167849 925 ntBASIC12.95□□□□□ -0.34
Tnfsf11O35235 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC12.95□□□□□ -0.34
Tnfsf11O35235 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC12.95□□□□□ -0.34
Tnfsf11O35235 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf11O35235 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf11O35235 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Tnfsf11O35235 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf11O35235 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC12.95□□□□□ -0.34
Tnfsf11O35235 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf11O35235 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf11O35235 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf11O35235 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.95□□□□□ -0.34
Tnfsf11O35235 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf11O35235 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf11O35235 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf11O35235 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC12.95□□□□□ -0.34
Tnfsf11O35235 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf11O35235 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.95□□□□□ -0.34
Tnfsf11O35235 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf11O35235 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfsf11O35235 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
Tnfsf11O35235 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf11O35235 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf11O35235 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf11O35235 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf11O35235 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.94□□□□□ -0.34
Tnfsf11O35235 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf11O35235 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf11O35235 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf11O35235 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Tnfsf11O35235 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf11O35235 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.94□□□□□ -0.34
Tnfsf11O35235 Gm11927-201ENSMUST00000118472 759 ntBASIC12.94□□□□□ -0.34
Tnfsf11O35235 Gm42555-201ENSMUST00000199304 1039 ntBASIC12.94□□□□□ -0.34
Tnfsf11O35235 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC12.94□□□□□ -0.34
Tnfsf11O35235 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Tnfsf11O35235 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Tnfsf11O35235 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf11O35235 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf11O35235 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf11O35235 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf11O35235 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf11O35235 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf11O35235 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf11O35235 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Tnfsf11O35235 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf11O35235 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf11O35235 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf11O35235 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfsf11O35235 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Tnfsf11O35235 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf11O35235 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Gm10849-201ENSMUST00000100397 618 ntBASIC12.93□□□□□ -0.34
Tnfsf11O35235 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Gm6576-201ENSMUST00000169678 883 ntBASIC12.93□□□□□ -0.34
Tnfsf11O35235 Gm18284-201ENSMUST00000172604 624 ntBASIC12.93□□□□□ -0.34
Tnfsf11O35235 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf11O35235 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf11O35235 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.93□□□□□ -0.34
Tnfsf11O35235 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms