Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col15a1O35206 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Col15a1O35206 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col15a1O35206 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Col15a1O35206 Gm5837-201ENSMUST00000191844 1369 ntBASIC21.17■□□□□ 0.98
Col15a1O35206 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
Col15a1O35206 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Col15a1O35206 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Col15a1O35206 Ddx41-204ENSMUST00000224765 2199 ntBASIC21.17■□□□□ 0.98
Col15a1O35206 Gm37500-201ENSMUST00000192059 1443 ntBASIC21.16■□□□□ 0.98
Col15a1O35206 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col15a1O35206 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
Col15a1O35206 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col15a1O35206 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC21.16■□□□□ 0.98
Col15a1O35206 AC122901.1-201ENSMUST00000214203 1790 ntBASIC21.16■□□□□ 0.98
Col15a1O35206 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Col15a1O35206 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Col15a1O35206 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC21.16■□□□□ 0.98
Col15a1O35206 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC21.16■□□□□ 0.98
Col15a1O35206 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col15a1O35206 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC21.16■□□□□ 0.98
Col15a1O35206 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col15a1O35206 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Col15a1O35206 Gm3928-201ENSMUST00000121141 1307 ntBASIC21.16■□□□□ 0.98
Col15a1O35206 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col15a1O35206 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Col15a1O35206 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col15a1O35206 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col15a1O35206 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col15a1O35206 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col15a1O35206 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col15a1O35206 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC21.15■□□□□ 0.98
Col15a1O35206 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC21.15■□□□□ 0.98
Col15a1O35206 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC21.15■□□□□ 0.98
Col15a1O35206 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col15a1O35206 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col15a1O35206 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Col15a1O35206 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Col15a1O35206 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Col15a1O35206 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Col15a1O35206 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Col15a1O35206 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Col15a1O35206 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Col15a1O35206 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC21.14■□□□□ 0.98
Col15a1O35206 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC21.14■□□□□ 0.98
Col15a1O35206 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC21.14■□□□□ 0.98
Col15a1O35206 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Col15a1O35206 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Col15a1O35206 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col15a1O35206 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col15a1O35206 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Col15a1O35206 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col15a1O35206 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Col15a1O35206 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Col15a1O35206 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col15a1O35206 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col15a1O35206 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col15a1O35206 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col15a1O35206 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col15a1O35206 Gm6184-201ENSMUST00000120403 1261 ntBASIC21.13■□□□□ 0.97
Col15a1O35206 Gm6736-201ENSMUST00000166583 948 ntBASIC21.13■□□□□ 0.97
Col15a1O35206 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Col15a1O35206 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Col15a1O35206 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC21.13■□□□□ 0.97
Col15a1O35206 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col15a1O35206 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col15a1O35206 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.13■□□□□ 0.97
Col15a1O35206 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC21.13■□□□□ 0.97
Col15a1O35206 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col15a1O35206 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Col15a1O35206 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Col15a1O35206 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Col15a1O35206 Gm25911-201ENSMUST00000157621 56 ntBASIC21.12■□□□□ 0.97
Col15a1O35206 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC21.12■□□□□ 0.97
Col15a1O35206 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Col15a1O35206 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col15a1O35206 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col15a1O35206 Gm10175-201ENSMUST00000086013 645 ntBASIC21.12■□□□□ 0.97
Col15a1O35206 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col15a1O35206 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col15a1O35206 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col15a1O35206 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col15a1O35206 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Col15a1O35206 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col15a1O35206 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Col15a1O35206 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col15a1O35206 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Col15a1O35206 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Col15a1O35206 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Col15a1O35206 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col15a1O35206 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Col15a1O35206 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC21.11■□□□□ 0.97
Col15a1O35206 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col15a1O35206 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col15a1O35206 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col15a1O35206 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col15a1O35206 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col15a1O35206 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Col15a1O35206 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Col15a1O35206 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms