Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.56■□□□□ 0.08
Cx3cl1O35188 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Cx3cl1O35188 Phf7-203ENSMUST00000226565 1971 ntBASIC15.55■□□□□ 0.08
Cx3cl1O35188 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cx3cl1O35188 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Cx3cl1O35188 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cx3cl1O35188 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cx3cl1O35188 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cx3cl1O35188 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Cx3cl1O35188 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Cx3cl1O35188 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.55■□□□□ 0.08
Cx3cl1O35188 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Cx3cl1O35188 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Cx3cl1O35188 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.55■□□□□ 0.08
Cx3cl1O35188 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cx3cl1O35188 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.55■□□□□ 0.08
Cx3cl1O35188 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cx3cl1O35188 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Cx3cl1O35188 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cl1O35188 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cl1O35188 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Cx3cl1O35188 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cl1O35188 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cl1O35188 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Cx3cl1O35188 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cl1O35188 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Cx3cl1O35188 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cl1O35188 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cl1O35188 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cl1O35188 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cl1O35188 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cl1O35188 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.54■□□□□ 0.08
Cx3cl1O35188 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cl1O35188 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cl1O35188 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cl1O35188 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cl1O35188 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Cx3cl1O35188 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cl1O35188 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cl1O35188 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cl1O35188 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cl1O35188 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cl1O35188 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cl1O35188 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cl1O35188 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cl1O35188 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Cx3cl1O35188 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cx3cl1O35188 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.53■□□□□ 0.08
Cx3cl1O35188 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cx3cl1O35188 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Cx3cl1O35188 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.53■□□□□ 0.08
Cx3cl1O35188 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.53■□□□□ 0.08
Cx3cl1O35188 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.53■□□□□ 0.08
Cx3cl1O35188 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Cx3cl1O35188 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.53■□□□□ 0.08
Cx3cl1O35188 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.53■□□□□ 0.08
Cx3cl1O35188 Gm18115-201ENSMUST00000221209 621 ntBASIC15.53■□□□□ 0.08
Cx3cl1O35188 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Cx3cl1O35188 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.53■□□□□ 0.08
Cx3cl1O35188 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cx3cl1O35188 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Cx3cl1O35188 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cx3cl1O35188 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cx3cl1O35188 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cx3cl1O35188 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Cx3cl1O35188 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cx3cl1O35188 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Cx3cl1O35188 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cx3cl1O35188 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cx3cl1O35188 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cx3cl1O35188 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.52■□□□□ 0.08
Cx3cl1O35188 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.52■□□□□ 0.08
Cx3cl1O35188 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Cx3cl1O35188 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
Cx3cl1O35188 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Cx3cl1O35188 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cx3cl1O35188 AA414768-201ENSMUST00000121924 1257 ntBASIC15.52■□□□□ 0.08
Cx3cl1O35188 Gm9013-201ENSMUST00000132939 882 ntBASIC15.52■□□□□ 0.08
Cx3cl1O35188 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Cx3cl1O35188 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cx3cl1O35188 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cx3cl1O35188 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Cx3cl1O35188 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.52■□□□□ 0.07
Cx3cl1O35188 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cx3cl1O35188 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Cx3cl1O35188 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cx3cl1O35188 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cx3cl1O35188 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
Cx3cl1O35188 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cx3cl1O35188 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Cx3cl1O35188 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Cx3cl1O35188 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms