Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gfra3O35118 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gfra3O35118 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gfra3O35118 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.31□□□□□ -0.12
Gfra3O35118 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gfra3O35118 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.31□□□□□ -0.12
Gfra3O35118 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gfra3O35118 Gm18421-201ENSMUST00000204122 625 ntBASIC14.31□□□□□ -0.12
Gfra3O35118 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gfra3O35118 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gfra3O35118 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Gfra3O35118 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gfra3O35118 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gfra3O35118 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Gfra3O35118 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gfra3O35118 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gfra3O35118 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.31□□□□□ -0.12
Gfra3O35118 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
Gfra3O35118 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gfra3O35118 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Gfra3O35118 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gfra3O35118 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.31□□□□□ -0.12
Gfra3O35118 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gfra3O35118 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gfra3O35118 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gfra3O35118 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gfra3O35118 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.31□□□□□ -0.12
Gfra3O35118 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gfra3O35118 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.3□□□□□ -0.12
Gfra3O35118 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Gfra3O35118 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gfra3O35118 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gfra3O35118 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.3□□□□□ -0.12
Gfra3O35118 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gfra3O35118 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.3□□□□□ -0.12
Gfra3O35118 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.3□□□□□ -0.12
Gfra3O35118 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.3□□□□□ -0.12
Gfra3O35118 Gm45328-201ENSMUST00000210942 917 ntBASIC14.3□□□□□ -0.12
Gfra3O35118 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Gfra3O35118 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gfra3O35118 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gfra3O35118 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gfra3O35118 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gfra3O35118 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gfra3O35118 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gfra3O35118 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gfra3O35118 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Gfra3O35118 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gfra3O35118 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gfra3O35118 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Gfra3O35118 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC14.29□□□□□ -0.12
Gfra3O35118 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gfra3O35118 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gfra3O35118 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gfra3O35118 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gfra3O35118 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gfra3O35118 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gfra3O35118 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Gfra3O35118 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gfra3O35118 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.29□□□□□ -0.12
Gfra3O35118 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gfra3O35118 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gfra3O35118 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Gfra3O35118 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gfra3O35118 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Gfra3O35118 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gfra3O35118 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gfra3O35118 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gfra3O35118 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gfra3O35118 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfra3O35118 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfra3O35118 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfra3O35118 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gfra3O35118 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
Gfra3O35118 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfra3O35118 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Gfra3O35118 Gm29707-201ENSMUST00000196325 491 ntBASIC14.28□□□□□ -0.12
Gfra3O35118 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.28□□□□□ -0.12
Gfra3O35118 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC14.28□□□□□ -0.12
Gfra3O35118 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfra3O35118 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfra3O35118 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gfra3O35118 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfra3O35118 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfra3O35118 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfra3O35118 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfra3O35118 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfra3O35118 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfra3O35118 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gfra3O35118 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Gfra3O35118 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Gfra3O35118 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gfra3O35118 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gfra3O35118 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gfra3O35118 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gfra3O35118 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gfra3O35118 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gfra3O35118 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gfra3O35118 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Gfra3O35118 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms