Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx1-1G3UXB3 Gm24590-201ENSMUST00000116699 119 ntBASIC18.88■□□□□ 0.61
Nkx1-1G3UXB3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx1-1G3UXB3 Gm27437-201ENSMUST00000183429 107 ntBASIC18.88■□□□□ 0.61
Nkx1-1G3UXB3 Gm27494-201ENSMUST00000184735 189 ntBASIC18.88■□□□□ 0.61
Nkx1-1G3UXB3 Gm29707-201ENSMUST00000196325 491 ntBASIC18.88■□□□□ 0.61
Nkx1-1G3UXB3 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Nkx1-1G3UXB3 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Nkx1-1G3UXB3 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx1-1G3UXB3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx1-1G3UXB3 Gm38262-201ENSMUST00000194760 1382 ntBASIC18.88■□□□□ 0.61
Nkx1-1G3UXB3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Nkx1-1G3UXB3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx1-1G3UXB3 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx1-1G3UXB3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx1-1G3UXB3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Nkx1-1G3UXB3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx1-1G3UXB3 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx1-1G3UXB3 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC18.87■□□□□ 0.61
Nkx1-1G3UXB3 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC18.87■□□□□ 0.61
Nkx1-1G3UXB3 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx1-1G3UXB3 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx1-1G3UXB3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Nkx1-1G3UXB3 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx1-1G3UXB3 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Nkx1-1G3UXB3 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx1-1G3UXB3 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx1-1G3UXB3 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx1-1G3UXB3 Gm45359-201ENSMUST00000210635 427 ntBASIC18.87■□□□□ 0.61
Nkx1-1G3UXB3 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.87■□□□□ 0.61
Nkx1-1G3UXB3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx1-1G3UXB3 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC18.87■□□□□ 0.61
Nkx1-1G3UXB3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx1-1G3UXB3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx1-1G3UXB3 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx1-1G3UXB3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx1-1G3UXB3 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx1-1G3UXB3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx1-1G3UXB3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx1-1G3UXB3 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx1-1G3UXB3 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx1-1G3UXB3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx1-1G3UXB3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx1-1G3UXB3 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.86■□□□□ 0.61
Nkx1-1G3UXB3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx1-1G3UXB3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx1-1G3UXB3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx1-1G3UXB3 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx1-1G3UXB3 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx1-1G3UXB3 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx1-1G3UXB3 Notumos-201ENSMUST00000151998 2659 ntBASIC18.86■□□□□ 0.61
Nkx1-1G3UXB3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Nkx1-1G3UXB3 Gm14126-201ENSMUST00000122345 395 ntBASIC18.86■□□□□ 0.61
Nkx1-1G3UXB3 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Nkx1-1G3UXB3 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx1-1G3UXB3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx1-1G3UXB3 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC18.86■□□□□ 0.61
Nkx1-1G3UXB3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC18.86■□□□□ 0.61
Nkx1-1G3UXB3 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx1-1G3UXB3 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx1-1G3UXB3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx1-1G3UXB3 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx1-1G3UXB3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx1-1G3UXB3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx1-1G3UXB3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx1-1G3UXB3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC18.85■□□□□ 0.61
Nkx1-1G3UXB3 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx1-1G3UXB3 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx1-1G3UXB3 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Nkx1-1G3UXB3 Gm11858-201ENSMUST00000117935 838 ntBASIC18.85■□□□□ 0.61
Nkx1-1G3UXB3 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx1-1G3UXB3 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx1-1G3UXB3 Gm43906-201ENSMUST00000203194 906 ntBASIC18.85■□□□□ 0.61
Nkx1-1G3UXB3 AC155729.1-201ENSMUST00000227758 544 ntBASIC18.85■□□□□ 0.61
Nkx1-1G3UXB3 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx1-1G3UXB3 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx1-1G3UXB3 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx1-1G3UXB3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx1-1G3UXB3 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx1-1G3UXB3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx1-1G3UXB3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Nkx1-1G3UXB3 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx1-1G3UXB3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx1-1G3UXB3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Nkx1-1G3UXB3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx1-1G3UXB3 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx1-1G3UXB3 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx1-1G3UXB3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Nkx1-1G3UXB3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx1-1G3UXB3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx1-1G3UXB3 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx1-1G3UXB3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Nkx1-1G3UXB3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC18.84■□□□□ 0.61
Nkx1-1G3UXB3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC18.84■□□□□ 0.61
Nkx1-1G3UXB3 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx1-1G3UXB3 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Nkx1-1G3UXB3 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
Nkx1-1G3UXB3 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nkx1-1G3UXB3 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Nkx1-1G3UXB3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms