Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh1F7BJK1 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh1F7BJK1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh1F7BJK1 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh1F7BJK1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh1F7BJK1 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.92□□□□□ -0.02
Pcdh1F7BJK1 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.92□□□□□ -0.02
Pcdh1F7BJK1 Gm18666-201ENSMUST00000190039 958 ntBASIC14.92□□□□□ -0.02
Pcdh1F7BJK1 Trmt13-210ENSMUST00000198454 880 ntBASIC14.92□□□□□ -0.02
Pcdh1F7BJK1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Pcdh1F7BJK1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh1F7BJK1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh1F7BJK1 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh1F7BJK1 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdh1F7BJK1 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh1F7BJK1 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh1F7BJK1 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh1F7BJK1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh1F7BJK1 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh1F7BJK1 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh1F7BJK1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh1F7BJK1 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh1F7BJK1 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh1F7BJK1 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Pcdh1F7BJK1 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh1F7BJK1 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Pcdh1F7BJK1 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh1F7BJK1 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh1F7BJK1 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh1F7BJK1 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh1F7BJK1 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh1F7BJK1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh1F7BJK1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdh1F7BJK1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.91□□□□□ -0.02
Pcdh1F7BJK1 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh1F7BJK1 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.91□□□□□ -0.02
Pcdh1F7BJK1 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh1F7BJK1 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.91□□□□□ -0.02
Pcdh1F7BJK1 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Pcdh1F7BJK1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh1F7BJK1 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh1F7BJK1 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdh1F7BJK1 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 Gm9731-201ENSMUST00000209480 747 ntBASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdh1F7BJK1 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh1F7BJK1 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh1F7BJK1 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh1F7BJK1 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh1F7BJK1 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh1F7BJK1 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh1F7BJK1 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh1F7BJK1 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdh1F7BJK1 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.89□□□□□ -0.03
Pcdh1F7BJK1 Gm37856-201ENSMUST00000191634 999 ntBASIC14.89□□□□□ -0.03
Pcdh1F7BJK1 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.89□□□□□ -0.03
Pcdh1F7BJK1 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh1F7BJK1 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
Pcdh1F7BJK1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh1F7BJK1 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh1F7BJK1 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh1F7BJK1 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh1F7BJK1 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh1F7BJK1 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh1F7BJK1 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh1F7BJK1 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh1F7BJK1 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdh1F7BJK1 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.89□□□□□ -0.03
Pcdh1F7BJK1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Pcdh1F7BJK1 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms