Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Ccdc188F6WEU2 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ccdc188F6WEU2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Ccdc188F6WEU2 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.69■□□□□ 0.26
Ccdc188F6WEU2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ccdc188F6WEU2 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc188F6WEU2 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc188F6WEU2 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Ccdc188F6WEU2 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.69■□□□□ 0.26
Ccdc188F6WEU2 Gm12151-201ENSMUST00000121374 290 ntBASIC16.69■□□□□ 0.26
Ccdc188F6WEU2 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.69■□□□□ 0.26
Ccdc188F6WEU2 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc188F6WEU2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc188F6WEU2 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Ccdc188F6WEU2 Mir6990-201ENSMUST00000183724 91 ntBASIC16.69■□□□□ 0.26
Ccdc188F6WEU2 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc188F6WEU2 Gm7653-201ENSMUST00000214567 508 ntBASIC16.69■□□□□ 0.26
Ccdc188F6WEU2 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.69■□□□□ 0.26
Ccdc188F6WEU2 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.69■□□□□ 0.26
Ccdc188F6WEU2 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc188F6WEU2 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Ccdc188F6WEU2 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Ccdc188F6WEU2 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ccdc188F6WEU2 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
Ccdc188F6WEU2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Ccdc188F6WEU2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc188F6WEU2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Ccdc188F6WEU2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
Ccdc188F6WEU2 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Ccdc188F6WEU2 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.68■□□□□ 0.26
Ccdc188F6WEU2 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.68■□□□□ 0.26
Ccdc188F6WEU2 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc188F6WEU2 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.68■□□□□ 0.26
Ccdc188F6WEU2 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc188F6WEU2 Rassf8-202ENSMUST00000058538 1131 ntBASIC16.68■□□□□ 0.26
Ccdc188F6WEU2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc188F6WEU2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc188F6WEU2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc188F6WEU2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc188F6WEU2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc188F6WEU2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Ccdc188F6WEU2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc188F6WEU2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc188F6WEU2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc188F6WEU2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc188F6WEU2 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc188F6WEU2 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc188F6WEU2 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.67■□□□□ 0.26
Ccdc188F6WEU2 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc188F6WEU2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc188F6WEU2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ccdc188F6WEU2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.67■□□□□ 0.26
Ccdc188F6WEU2 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Ccdc188F6WEU2 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc188F6WEU2 Gm45612-201ENSMUST00000211320 160 ntBASIC16.67■□□□□ 0.26
Ccdc188F6WEU2 Gm9172-201ENSMUST00000212092 954 ntBASIC16.67■□□□□ 0.26
Ccdc188F6WEU2 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.67■□□□□ 0.26
Ccdc188F6WEU2 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc188F6WEU2 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc188F6WEU2 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.67■□□□□ 0.26
Ccdc188F6WEU2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.67■□□□□ 0.26
Ccdc188F6WEU2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc188F6WEU2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc188F6WEU2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc188F6WEU2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc188F6WEU2 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc188F6WEU2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc188F6WEU2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Ccdc188F6WEU2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc188F6WEU2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc188F6WEU2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc188F6WEU2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.66■□□□□ 0.26
Ccdc188F6WEU2 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc188F6WEU2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc188F6WEU2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc188F6WEU2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc188F6WEU2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc188F6WEU2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc188F6WEU2 Mir449b-201ENSMUST00000104833 80 ntBASIC16.66■□□□□ 0.26
Ccdc188F6WEU2 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.66■□□□□ 0.26
Ccdc188F6WEU2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc188F6WEU2 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.66■□□□□ 0.26
Ccdc188F6WEU2 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.66■□□□□ 0.26
Ccdc188F6WEU2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc188F6WEU2 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Ccdc188F6WEU2 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.66■□□□□ 0.26
Ccdc188F6WEU2 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc188F6WEU2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc188F6WEU2 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc188F6WEU2 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc188F6WEU2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc188F6WEU2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc188F6WEU2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Ccdc188F6WEU2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc188F6WEU2 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc188F6WEU2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc188F6WEU2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc188F6WEU2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Ccdc188F6WEU2 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc188F6WEU2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms