Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb9E9Q5G2 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb9E9Q5G2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb9E9Q5G2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb9E9Q5G2 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb9E9Q5G2 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Pcdhb9E9Q5G2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb9E9Q5G2 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb9E9Q5G2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb9E9Q5G2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb9E9Q5G2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC19.44■□□□□ 0.7
Pcdhb9E9Q5G2 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.44■□□□□ 0.7
Pcdhb9E9Q5G2 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb9E9Q5G2 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.44■□□□□ 0.7
Pcdhb9E9Q5G2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.44■□□□□ 0.7
Pcdhb9E9Q5G2 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.44■□□□□ 0.7
Pcdhb9E9Q5G2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.44■□□□□ 0.7
Pcdhb9E9Q5G2 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb9E9Q5G2 Gm28033-201ENSMUST00000184224 96 ntBASIC19.44■□□□□ 0.7
Pcdhb9E9Q5G2 Gm36967-201ENSMUST00000193814 266 ntBASIC19.44■□□□□ 0.7
Pcdhb9E9Q5G2 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC19.44■□□□□ 0.7
Pcdhb9E9Q5G2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb9E9Q5G2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb9E9Q5G2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Pcdhb9E9Q5G2 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb9E9Q5G2 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Pcdhb9E9Q5G2 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb9E9Q5G2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb9E9Q5G2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb9E9Q5G2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.43■□□□□ 0.7
Pcdhb9E9Q5G2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.43■□□□□ 0.7
Pcdhb9E9Q5G2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Pcdhb9E9Q5G2 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb9E9Q5G2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.43■□□□□ 0.7
Pcdhb9E9Q5G2 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb9E9Q5G2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb9E9Q5G2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC19.43■□□□□ 0.7
Pcdhb9E9Q5G2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb9E9Q5G2 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdhb9E9Q5G2 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb9E9Q5G2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb9E9Q5G2 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb9E9Q5G2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb9E9Q5G2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb9E9Q5G2 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb9E9Q5G2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb9E9Q5G2 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb9E9Q5G2 Gm18669-201ENSMUST00000216049 778 ntBASIC19.42■□□□□ 0.7
Pcdhb9E9Q5G2 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb9E9Q5G2 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb9E9Q5G2 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb9E9Q5G2 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.42■□□□□ 0.7
Pcdhb9E9Q5G2 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb9E9Q5G2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb9E9Q5G2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb9E9Q5G2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdhb9E9Q5G2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb9E9Q5G2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb9E9Q5G2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb9E9Q5G2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb9E9Q5G2 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb9E9Q5G2 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb9E9Q5G2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb9E9Q5G2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb9E9Q5G2 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb9E9Q5G2 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb9E9Q5G2 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb9E9Q5G2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb9E9Q5G2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Pcdhb9E9Q5G2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb9E9Q5G2 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.41■□□□□ 0.7
Pcdhb9E9Q5G2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Pcdhb9E9Q5G2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdhb9E9Q5G2 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pcdhb9E9Q5G2 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb9E9Q5G2 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb9E9Q5G2 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb9E9Q5G2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb9E9Q5G2 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb9E9Q5G2 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Pcdhb9E9Q5G2 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb9E9Q5G2 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb9E9Q5G2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Pcdhb9E9Q5G2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb9E9Q5G2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb9E9Q5G2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb9E9Q5G2 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdhb9E9Q5G2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Pcdhb9E9Q5G2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.7
Pcdhb9E9Q5G2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhb9E9Q5G2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhb9E9Q5G2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Pcdhb9E9Q5G2 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb9E9Q5G2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb9E9Q5G2 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb9E9Q5G2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.39■□□□□ 0.69
Pcdhb9E9Q5G2 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb9E9Q5G2 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.39■□□□□ 0.69
Pcdhb9E9Q5G2 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdhb9E9Q5G2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms