Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.5■□□□□ 0.23
Col6a3E9PWQ3 Thap2-203ENSMUST00000218989 527 ntBASIC16.5■□□□□ 0.23
Col6a3E9PWQ3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a3E9PWQ3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a3E9PWQ3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a3E9PWQ3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a3E9PWQ3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a3E9PWQ3 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a3E9PWQ3 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Col6a3E9PWQ3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.5■□□□□ 0.23
Col6a3E9PWQ3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a3E9PWQ3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a3E9PWQ3 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a3E9PWQ3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a3E9PWQ3 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a3E9PWQ3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a3E9PWQ3 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Col6a3E9PWQ3 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a3E9PWQ3 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Col6a3E9PWQ3 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a3E9PWQ3 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a3E9PWQ3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a3E9PWQ3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a3E9PWQ3 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.49■□□□□ 0.23
Col6a3E9PWQ3 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.49■□□□□ 0.23
Col6a3E9PWQ3 Mir7684-201ENSMUST00000183858 60 ntBASIC16.49■□□□□ 0.23
Col6a3E9PWQ3 Gm8602-201ENSMUST00000184045 607 ntBASIC16.49■□□□□ 0.23
Col6a3E9PWQ3 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a3E9PWQ3 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Col6a3E9PWQ3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a3E9PWQ3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a3E9PWQ3 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a3E9PWQ3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.49■□□□□ 0.23
Col6a3E9PWQ3 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a3E9PWQ3 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.49■□□□□ 0.23
Col6a3E9PWQ3 Gm7730-201ENSMUST00000212486 454 ntBASIC16.49■□□□□ 0.23
Col6a3E9PWQ3 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Col6a3E9PWQ3 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a3E9PWQ3 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Col6a3E9PWQ3 Gm22065-201ENSMUST00000103753 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm22066-201ENSMUST00000103761 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm24932-201ENSMUST00000103763 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm24115-201ENSMUST00000103799 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm22190-201ENSMUST00000103827 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm22191-201ENSMUST00000103831 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm24721-201ENSMUST00000103849 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm28018-201ENSMUST00000103869 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm26399-201ENSMUST00000103937 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm25349-201ENSMUST00000177728 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm23616-201ENSMUST00000177797 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm25871-201ENSMUST00000177816 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm24752-201ENSMUST00000178240 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm24496-201ENSMUST00000178287 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm25649-201ENSMUST00000178476 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm25548-201ENSMUST00000178681 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm23147-201ENSMUST00000178841 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm26095-201ENSMUST00000179270 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm22171-201ENSMUST00000179283 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm23936-201ENSMUST00000179354 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm22619-201ENSMUST00000179516 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm25255-201ENSMUST00000179579 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm24755-201ENSMUST00000179691 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm26506-201ENSMUST00000179692 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm25086-201ENSMUST00000179931 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm23243-201ENSMUST00000180047 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm24659-201ENSMUST00000180212 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm24169-201ENSMUST00000180244 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm23689-201ENSMUST00000180354 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm27359-201ENSMUST00000184153 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm27785-201ENSMUST00000184268 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm27466-201ENSMUST00000184396 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm27703-201ENSMUST00000184836 110 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Col6a3E9PWQ3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col6a3E9PWQ3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms