Protein–RNA interactions for Protein: C0HKE4

Hist1h2ae, Histone H2A type 1-E, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aeC0HKE4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.16■□□□□ 0.02
Hist1h2aeC0HKE4 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h2aeC0HKE4 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h2aeC0HKE4 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Hist1h2aeC0HKE4 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h2aeC0HKE4 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h2aeC0HKE4 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.16■□□□□ 0.02
Hist1h2aeC0HKE4 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.16■□□□□ 0.02
Hist1h2aeC0HKE4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Hist1h2aeC0HKE4 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h2aeC0HKE4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h2aeC0HKE4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h2aeC0HKE4 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Hist1h2aeC0HKE4 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h2aeC0HKE4 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.15■□□□□ 0.02
Hist1h2aeC0HKE4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h2aeC0HKE4 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h2aeC0HKE4 Dancr-204ENSMUST00000132389 2347 ntBASIC15.15■□□□□ 0.02
Hist1h2aeC0HKE4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h2aeC0HKE4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h2aeC0HKE4 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h2aeC0HKE4 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h2aeC0HKE4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Hist1h2aeC0HKE4 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.15■□□□□ 0.02
Hist1h2aeC0HKE4 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h2aeC0HKE4 Gm13216-201ENSMUST00000117145 591 ntBASIC15.15■□□□□ 0.02
Hist1h2aeC0HKE4 Gm27000-201ENSMUST00000182943 842 ntBASIC15.15■□□□□ 0.02
Hist1h2aeC0HKE4 Gm27463-201ENSMUST00000183569 57 ntBASIC15.15■□□□□ 0.02
Hist1h2aeC0HKE4 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h2aeC0HKE4 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Hist1h2aeC0HKE4 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.15■□□□□ 0.02
Hist1h2aeC0HKE4 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Hist1h2aeC0HKE4 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h2aeC0HKE4 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h2aeC0HKE4 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Hist1h2aeC0HKE4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h2aeC0HKE4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h2aeC0HKE4 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h2aeC0HKE4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Hist1h2aeC0HKE4 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.15■□□□□ 0.02
Hist1h2aeC0HKE4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h2aeC0HKE4 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h2aeC0HKE4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Hist1h2aeC0HKE4 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h2aeC0HKE4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h2aeC0HKE4 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h2aeC0HKE4 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h2aeC0HKE4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h2aeC0HKE4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h2aeC0HKE4 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h2aeC0HKE4 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h2aeC0HKE4 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h2aeC0HKE4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h2aeC0HKE4 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.14■□□□□ 0.01
Hist1h2aeC0HKE4 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h2aeC0HKE4 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h2aeC0HKE4 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.14■□□□□ 0.01
Hist1h2aeC0HKE4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.14■□□□□ 0.01
Hist1h2aeC0HKE4 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h2aeC0HKE4 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC15.14■□□□□ 0.01
Hist1h2aeC0HKE4 Gm7791-201ENSMUST00000219066 539 ntBASIC15.14■□□□□ 0.01
Hist1h2aeC0HKE4 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h2aeC0HKE4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Hist1h2aeC0HKE4 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h2aeC0HKE4 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h2aeC0HKE4 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h2aeC0HKE4 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Hist1h2aeC0HKE4 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h2aeC0HKE4 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hist1h2aeC0HKE4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Hist1h2aeC0HKE4 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.14■□□□□ 0.01
Hist1h2aeC0HKE4 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Hist1h2aeC0HKE4 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hist1h2aeC0HKE4 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Hist1h2aeC0HKE4 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC15.13■□□□□ 0.01
Hist1h2aeC0HKE4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hist1h2aeC0HKE4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hist1h2aeC0HKE4 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hist1h2aeC0HKE4 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.13■□□□□ 0.01
Hist1h2aeC0HKE4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.13■□□□□ 0.01
Hist1h2aeC0HKE4 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hist1h2aeC0HKE4 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hist1h2aeC0HKE4 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hist1h2aeC0HKE4 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Hist1h2aeC0HKE4 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Hist1h2aeC0HKE4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hist1h2aeC0HKE4 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hist1h2aeC0HKE4 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hist1h2aeC0HKE4 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hist1h2aeC0HKE4 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hist1h2aeC0HKE4 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hist1h2aeC0HKE4 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hist1h2aeC0HKE4 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hist1h2aeC0HKE4 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hist1h2aeC0HKE4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Hist1h2aeC0HKE4 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
Hist1h2aeC0HKE4 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Hist1h2aeC0HKE4 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Hist1h2aeC0HKE4 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hist1h2aeC0HKE4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms