Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rrn3B2RS91 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rrn3B2RS91 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rrn3B2RS91 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrn3B2RS91 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.65■□□□□ 0.26
Rrn3B2RS91 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rrn3B2RS91 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrn3B2RS91 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.65■□□□□ 0.26
Rrn3B2RS91 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rrn3B2RS91 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rrn3B2RS91 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Rrn3B2RS91 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrn3B2RS91 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrn3B2RS91 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrn3B2RS91 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrn3B2RS91 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.65■□□□□ 0.26
Rrn3B2RS91 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.65■□□□□ 0.26
Rrn3B2RS91 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC16.65■□□□□ 0.26
Rrn3B2RS91 Gm5587-201ENSMUST00000206270 674 ntBASIC16.65■□□□□ 0.26
Rrn3B2RS91 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrn3B2RS91 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Rrn3B2RS91 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrn3B2RS91 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrn3B2RS91 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrn3B2RS91 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rrn3B2RS91 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrn3B2RS91 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Rrn3B2RS91 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrn3B2RS91 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.65■□□□□ 0.26
Rrn3B2RS91 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrn3B2RS91 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrn3B2RS91 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrn3B2RS91 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rrn3B2RS91 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Rrn3B2RS91 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rrn3B2RS91 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Rrn3B2RS91 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rrn3B2RS91 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rrn3B2RS91 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rrn3B2RS91 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rrn3B2RS91 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rrn3B2RS91 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rrn3B2RS91 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.64■□□□□ 0.25
Rrn3B2RS91 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Rrn3B2RS91 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rrn3B2RS91 Gm13186-201ENSMUST00000118031 316 ntBASIC16.64■□□□□ 0.25
Rrn3B2RS91 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rrn3B2RS91 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.64■□□□□ 0.25
Rrn3B2RS91 Gm18115-201ENSMUST00000221209 621 ntBASIC16.64■□□□□ 0.25
Rrn3B2RS91 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rrn3B2RS91 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rrn3B2RS91 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rrn3B2RS91 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Rrn3B2RS91 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rrn3B2RS91 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rrn3B2RS91 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rrn3B2RS91 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrn3B2RS91 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrn3B2RS91 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrn3B2RS91 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrn3B2RS91 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrn3B2RS91 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrn3B2RS91 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Rrn3B2RS91 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Rrn3B2RS91 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrn3B2RS91 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrn3B2RS91 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrn3B2RS91 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrn3B2RS91 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrn3B2RS91 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rrn3B2RS91 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrn3B2RS91 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrn3B2RS91 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rrn3B2RS91 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrn3B2RS91 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rrn3B2RS91 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrn3B2RS91 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rrn3B2RS91 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rrn3B2RS91 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rrn3B2RS91 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rrn3B2RS91 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rrn3B2RS91 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rrn3B2RS91 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rrn3B2RS91 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rrn3B2RS91 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rrn3B2RS91 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rrn3B2RS91 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rrn3B2RS91 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.62■□□□□ 0.25
Rrn3B2RS91 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Rrn3B2RS91 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.62■□□□□ 0.25
Rrn3B2RS91 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rrn3B2RS91 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Rrn3B2RS91 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rrn3B2RS91 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rrn3B2RS91 Gm10566-201ENSMUST00000086739 996 ntBASIC16.62■□□□□ 0.25
Rrn3B2RS91 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rrn3B2RS91 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rrn3B2RS91 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rrn3B2RS91 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rrn3B2RS91 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms