Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5640A3KG49 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5640A3KG49 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5640A3KG49 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
Gm5640A3KG49 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.85■□□□□ 0.29
Gm5640A3KG49 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.85■□□□□ 0.29
Gm5640A3KG49 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Gm5640A3KG49 Mtag2-201ENSMUST00000058665 714 ntBASIC16.85■□□□□ 0.29
Gm5640A3KG49 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5640A3KG49 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Gm5640A3KG49 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Gm5640A3KG49 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5640A3KG49 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5640A3KG49 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5640A3KG49 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5640A3KG49 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Gm5640A3KG49 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.85■□□□□ 0.29
Gm5640A3KG49 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.84■□□□□ 0.29
Gm5640A3KG49 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5640A3KG49 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5640A3KG49 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5640A3KG49 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5640A3KG49 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.84■□□□□ 0.29
Gm5640A3KG49 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5640A3KG49 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5640A3KG49 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5640A3KG49 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.84■□□□□ 0.29
Gm5640A3KG49 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5640A3KG49 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Gm5640A3KG49 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5640A3KG49 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5640A3KG49 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Gm5640A3KG49 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5640A3KG49 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5640A3KG49 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.84■□□□□ 0.29
Gm5640A3KG49 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gm5640A3KG49 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Gm5640A3KG49 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
Gm5640A3KG49 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Gm5640A3KG49 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Gm5640A3KG49 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5640A3KG49 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5640A3KG49 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5640A3KG49 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5640A3KG49 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5640A3KG49 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC16.83■□□□□ 0.28
Gm5640A3KG49 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.83■□□□□ 0.28
Gm5640A3KG49 Gm18671-201ENSMUST00000214826 683 ntBASIC16.83■□□□□ 0.28
Gm5640A3KG49 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC16.83■□□□□ 0.28
Gm5640A3KG49 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Gm5640A3KG49 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5640A3KG49 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Gm5640A3KG49 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5640A3KG49 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5640A3KG49 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5640A3KG49 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5640A3KG49 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gm5640A3KG49 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Gm5640A3KG49 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5640A3KG49 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5640A3KG49 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5640A3KG49 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5640A3KG49 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5640A3KG49 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Gm5640A3KG49 Gm7290-201ENSMUST00000104990 617 ntBASIC16.82■□□□□ 0.28
Gm5640A3KG49 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.82■□□□□ 0.28
Gm5640A3KG49 Gm15039-201ENSMUST00000118914 875 ntBASIC16.82■□□□□ 0.28
Gm5640A3KG49 Gm12918-201ENSMUST00000120234 636 ntBASIC16.82■□□□□ 0.28
Gm5640A3KG49 Gm15710-201ENSMUST00000121821 636 ntBASIC16.82■□□□□ 0.28
Gm5640A3KG49 Gm8495-201ENSMUST00000188740 694 ntBASIC16.82■□□□□ 0.28
Gm5640A3KG49 Gm5075-201ENSMUST00000196916 622 ntBASIC16.82■□□□□ 0.28
Gm5640A3KG49 Gm10138-203ENSMUST00000206952 366 ntBASIC16.82■□□□□ 0.28
Gm5640A3KG49 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.82■□□□□ 0.28
Gm5640A3KG49 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.82■□□□□ 0.28
Gm5640A3KG49 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5640A3KG49 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Gm5640A3KG49 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5640A3KG49 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5640A3KG49 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5640A3KG49 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gm5640A3KG49 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.82■□□□□ 0.28
Gm5640A3KG49 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.82■□□□□ 0.28
Gm5640A3KG49 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.82■□□□□ 0.28
Gm5640A3KG49 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5640A3KG49 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5640A3KG49 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5640A3KG49 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5640A3KG49 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.81■□□□□ 0.28
Gm5640A3KG49 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5640A3KG49 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5640A3KG49 Gm6211-202ENSMUST00000167849 925 ntBASIC16.81■□□□□ 0.28
Gm5640A3KG49 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.81■□□□□ 0.28
Gm5640A3KG49 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5640A3KG49 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5640A3KG49 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.81■□□□□ 0.28
Gm5640A3KG49 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gm5640A3KG49 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.81■□□□□ 0.28
Gm5640A3KG49 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.81■□□□□ 0.28
Gm5640A3KG49 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.81■□□□□ 0.28
Gm5640A3KG49 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms