Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm7506-201ENSMUST00000207758 815 ntBASIC13.91□□□□□ -0.18
Col6a4A2AX52 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a4A2AX52 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a4A2AX52 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a4A2AX52 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Col6a4A2AX52 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a4A2AX52 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a4A2AX52 Gm6627-201ENSMUST00000218299 2386 ntBASIC13.91□□□□□ -0.18
Col6a4A2AX52 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a4A2AX52 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a4A2AX52 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a4A2AX52 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a4A2AX52 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a4A2AX52 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a4A2AX52 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a4A2AX52 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a4A2AX52 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a4A2AX52 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a4A2AX52 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Col6a4A2AX52 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a4A2AX52 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a4A2AX52 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Col6a4A2AX52 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Col6a4A2AX52 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.9□□□□□ -0.18
Col6a4A2AX52 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a4A2AX52 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Col6a4A2AX52 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a4A2AX52 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a4A2AX52 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Col6a4A2AX52 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC13.9□□□□□ -0.18
Col6a4A2AX52 Gm12260-201ENSMUST00000122447 411 ntBASIC13.9□□□□□ -0.18
Col6a4A2AX52 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.9□□□□□ -0.18
Col6a4A2AX52 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Col6a4A2AX52 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a4A2AX52 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a4A2AX52 Gm27628-201ENSMUST00000184911 107 ntBASIC13.9□□□□□ -0.18
Col6a4A2AX52 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.9□□□□□ -0.18
Col6a4A2AX52 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.9□□□□□ -0.18
Col6a4A2AX52 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a4A2AX52 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a4A2AX52 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a4A2AX52 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Col6a4A2AX52 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a4A2AX52 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a4A2AX52 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a4A2AX52 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.9□□□□□ -0.18
Col6a4A2AX52 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a4A2AX52 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC13.9□□□□□ -0.18
Col6a4A2AX52 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a4A2AX52 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC13.9□□□□□ -0.18
Col6a4A2AX52 Gm13312-201ENSMUST00000119631 718 ntBASIC13.9□□□□□ -0.18
Col6a4A2AX52 Gm7230-201ENSMUST00000173026 815 ntBASIC13.9□□□□□ -0.18
Col6a4A2AX52 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a4A2AX52 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a4A2AX52 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col6a4A2AX52 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Col6a4A2AX52 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Col6a4A2AX52 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a4A2AX52 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a4A2AX52 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Col6a4A2AX52 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a4A2AX52 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a4A2AX52 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.89□□□□□ -0.19
Col6a4A2AX52 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.89□□□□□ -0.19
Col6a4A2AX52 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a4A2AX52 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a4A2AX52 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Col6a4A2AX52 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a4A2AX52 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Col6a4A2AX52 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a4A2AX52 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a4A2AX52 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a4A2AX52 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Col6a4A2AX52 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Col6a4A2AX52 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Col6a4A2AX52 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.89□□□□□ -0.19
Col6a4A2AX52 Gm24513-201ENSMUST00000174964 138 ntBASIC13.89□□□□□ -0.19
Col6a4A2AX52 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.89□□□□□ -0.19
Col6a4A2AX52 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col6a4A2AX52 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a4A2AX52 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a4A2AX52 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a4A2AX52 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a4A2AX52 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a4A2AX52 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a4A2AX52 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a4A2AX52 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.88□□□□□ -0.19
Col6a4A2AX52 Gm14140-201ENSMUST00000119999 995 ntBASIC13.88□□□□□ -0.19
Col6a4A2AX52 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Col6a4A2AX52 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.88□□□□□ -0.19
Col6a4A2AX52 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.88□□□□□ -0.19
Col6a4A2AX52 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a4A2AX52 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a4A2AX52 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Col6a4A2AX52 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a4A2AX52 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Col6a4A2AX52 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a4A2AX52 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.88□□□□□ -0.19
Col6a4A2AX52 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col6a4A2AX52 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms